A0QCF4 (A0QCF4_MYCA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinyl-diaminopimelate desuccinylase EMBL ABK65126.1
EC=3.5.1.18 EMBL ABK65126.1

Gene names

Name:	dapE EMBL ABK65126.1
Ordered Locus Names:	MAV_1349 EMBL ABK65126.1

Organism

Mycobacterium avium (strain 104) [Complete proteome] [HAMAP] EMBL ABK65126.1

Taxonomic identifier

243243 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC) › Mycobacterium avium

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase SAAS SAAS001261 EMBL ABK65126.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro proteolysis Inferred from electronic annotation. Source: InterPro
Molecular_function	metallopeptidase activity Inferred from electronic annotation. Source: InterPro succinyl-diaminopimelate desuccinylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0QCF4 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 5FC4CC6CDD9D8D72	FASTA	354	36,982
	10 20 30 40 50 60 MLDLTGDPVA LTAALVDIPS ESRDEARLAD EVEAALRSQT SGFEIVRNGN AVLARTDRGR 70 80 90 100 110 120 PSRVLLAGHL DTVPVAGNLP SRREDGDLYG CGTADMKSGD AVFLHLAATV ADPAHDLTLV 130 140 150 160 170 180 MYDCEEIDAA ANGLGRIQRE LPDWLSADVA ILGEPTGGYI EAGCQGTLRV VVSATGTRAH 190 200 210 220 230 240 SARSWLGDNA IHKLGAVLQR LAGYQARSVE IDGCTYREGL SAVRIDGGVA GNVIPDAAAV 250 260 270 280 290 300 TVNFRFAPDR SPAEALQHVR DVLDGLDVRI EQTDAAAGAL PGLSQPAAKA LVEAAGGRVR 310 320 330 340 350 AKYGWTDVAR FAALGIPALN FGPGDPNLAH RRDERVAVAA ITAAADLLRG YLSG

References

[1]	Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 104 EMBL ABK65126.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000479 Genomic DNA. Translation: ABK65126.1.
RefSeq	YP_880592.1. NC_008595.1.
3D structure databases
ProteinModelPortal	A0QCF4.
ModBase	Search...
Protein-protein interaction databases
STRING	243243.MAV_1349.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK65126; ABK65126; MAV_1349.
GeneID	4530227.
KEGG	mav:MAV_1349.
PATRIC	17984439. VBIMycAvi38287_1321.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0624.
HOGENOM	HOG000243771.
KO	K01439.
OMA	CQGTMRV.
ProtClustDB	PRK13007.
Enzyme and pathway databases
BioCyc	MAVI243243:GH3Y-1348-MONOMER.
Family and domain databases
Gene3D	3.30.70.360. 1 hit.
InterPro	IPR001261. ArgE/DapE_CS. IPR002933. Peptidase_M20. IPR011650. Peptidase_M20_dimer. IPR010174. Succinyl-DAP_deSuclase_DapE. [Graphical view]
Pfam	PF07687. M20_dimer. 1 hit. PF01546. Peptidase_M20. 1 hit. [Graphical view]
SUPFAM	SSF55031. Peptidase_M20_dimer. 1 hit.
TIGRFAMs	TIGR01900. dapE-gram_pos. 1 hit.
PROSITE	PS00758. ARGE_DAPE_CPG2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0QCF4_MYCA1

Accession

Primary (citable) accession number: A0QCF4

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	May 29, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)