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A0QBM3 (A0QBM3_MYCA1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length766 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A0QBM3 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: DE06CD2799380FB0

FASTA76685,324
        10         20         30         40         50         60 
MNAPRAWPAE PTATPRVKLT NADKVLYPAT GTTKADVFDY YTRIADVMIP HIAGRPVTRK 

        70         80         90        100        110        120 
RWPNGVDQES FFEKQLASSA PDWLPRASVT HRSGTTTYPI IDSATGLAWI AQQAALEVHV 

       130        140        150        160        170        180 
PQWRFVAEWT RSRAEELKPG PATRLVFDLD PGEGVTMAQL AEVARAVRDL IDGIGLQTFP 

       190        200        210        220        230        240 
LTSGSKGLHL YTPLTEPVSS KGATVLAKRV AQQLEKTMPK LVTSTMTKSL RAGKIFVDWS 

       250        260        270        280        290        300 
QNNGSKTTIA PYSLRGRDHP TVAAPRTWDE LDDPALRHLR YDEVLTRVAR DGDLLAELDA 

       310        320        330        340        350        360 
SDNQTPVPDR LTKYRSMRDA SKTPEPVPAA KPAAGRGNTF VIQEHHARRL HYDFRLERDG 

       370        380        390        400        410        420 
VLVSWAVPKN LPDTPAVNHL AVHTEDHPLE YGGFEGVIPK GEYGAGRVVI WDSGTYDAEK 

       430        440        450        460        470        480 
FQDDEVIVNL HGRKISGRYA LIQTEGDQWL AHRMKDQNVF DFDTIAPMLA THGSVSALKA 

       490        500        510        520        530        540 
SQWAFEGKWD GYRLLVEADH GTLRVRSRRG REVTGEYREL RSLAKALEEH HAVLDGEAVV 

       550        560        570        580        590        600 
LDKRGVPNFH EMQNRGKSAR VEFWAFDLLY LDGRSLLRAR YRDRRKLLEM LASGGDLTVP 

       610        620        630        640        650        660 
ELLPGDGDQA LRQSAERGWE GVIAKRRDST YQPGRRSSSW IKDKHWNTQE VVIGGWKAGE 

       670        680        690        700        710        720 
GGRSSGIGSL LMGIPGPGGL HFAGRVGTGF TERDLANLKK TLAPLRTDQS PFDAPLPRSE 

       730        740        750        760 
AKGVTFVEPV LVGEVRYSEW TPDDRLRQSS WRGLRPDKEA SEVVRE 

« Hide

References

[1]Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 104 EMBL ABK69452.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000479 Genomic DNA. Translation: ABK69452.1.
RefSeqYP_880311.1. NC_008595.1.

3D structure databases

ProteinModelPortalA0QBM3.
SMRA0QBM3. Positions 16-300, 460-766.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243243.MAV_1056.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK69452; ABK69452; MAV_1056.
GeneID4527070.
KEGGmav:MAV_1056.
PATRIC17983847. VBIMycAvi38287_1029.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycMAVI243243:GH3Y-1056-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0QBM3_MYCA1
AccessionPrimary (citable) accession number: A0QBM3
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)