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A0Q9R1 (A0Q9R1_MYCA1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA polymerase LigD, polymerase domain EMBL ABK68595.1
Gene names
Name:ligD EMBL ABK68595.1
Ordered Locus Names:MAV_0362 EMBL ABK68595.1
OrganismMycobacterium avium (strain 104) [Complete proteome] [HAMAP] EMBL ABK68595.1
Taxonomic identifier243243 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC) ›

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0Q9R1 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: 7EE5757BAB849216

FASTA34238,244
        10         20         30         40         50         60 
MAAAEEVDVD GIAVRLTNPD KVYFPKLGSK GTKRHLIDYY RAVAGGPMLD ALRDRPTHLQ 

        70         80         90        100        110        120 
RFPDGIDGEE IYQKRIPQHH PDYLQTCRVT FPSGRTADAL KVTHPAAIVW AAQMGTVTLH 

       130        140        150        160        170        180 
PWQVRCPETD HPDELRIDLD PQPGVAFAQA RSVAVDVLRP LLDELGLVGY PKTSGGRGIH 

       190        200        210        220        230        240 
VFLRIATDWD FVEVRRAGIA LAREVERRAP DAVTTSWWKE ERGARIFIDF NQNARDRTMA 

       250        260        270        280        290        300 
SAYSVRRTPI ATVSMPLTWD QLAGADPDDY TMATVPDLVS ARENPWAAID DVAQSIGPLL 

       310        320        330        340 
RMAEADEERG LGDMPYPPNY PKMPGEPKRV QPSRDTEHKK KN

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References

[1]Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 104 EMBL ABK68595.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000479 Genomic DNA. Translation: ABK68595.1.
RefSeqYP_879649.1. NC_008595.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING243243.MAV_0362.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK68595; ABK68595; MAV_0362.
GeneID4526254.
KEGGmav:MAV_0362.
PATRIC17982468. VBIMycAvi38287_0351.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000244654.
KOK01971.
OMAPPEYPKM.
ProtClustDBCLSK872243.

Enzyme and pathway databases

BioCycMAVI243243:GH3Y-405-MONOMER.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0Q9R1_MYCA1
AccessionPrimary (citable) accession number: A0Q9R1
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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