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A0Q9R1

- A0Q9R1_MYCA1

UniProt

A0Q9R1 - A0Q9R1_MYCA1

Protein
Submitted name:

DNA polymerase LigD, polymerase domain

Gene

ligD

Organism
Mycobacterium avium (strain 104)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA primase activity Source: InterPro

    Enzyme and pathway databases

    BioCyciMAVI243243:GH3Y-362-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domainImported
    Gene namesi
    Name:ligDImported
    Ordered Locus Names:MAV_0362Imported
    OrganismiMycobacterium avium (strain 104)Imported
    Taxonomic identifieri243243 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
    ProteomesiUP000001574: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi243243.MAV_0362.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiFHPWPVR.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A0Q9R1-1 [UniParc]FASTAAdd to Basket

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    MAAAEEVDVD GIAVRLTNPD KVYFPKLGSK GTKRHLIDYY RAVAGGPMLD    50
    ALRDRPTHLQ RFPDGIDGEE IYQKRIPQHH PDYLQTCRVT FPSGRTADAL 100
    KVTHPAAIVW AAQMGTVTLH PWQVRCPETD HPDELRIDLD PQPGVAFAQA 150
    RSVAVDVLRP LLDELGLVGY PKTSGGRGIH VFLRIATDWD FVEVRRAGIA 200
    LAREVERRAP DAVTTSWWKE ERGARIFIDF NQNARDRTMA SAYSVRRTPI 250
    ATVSMPLTWD QLAGADPDDY TMATVPDLVS ARENPWAAID DVAQSIGPLL 300
    RMAEADEERG LGDMPYPPNY PKMPGEPKRV QPSRDTEHKK KN 342
    Length:342
    Mass (Da):38,244
    Last modified:January 9, 2007 - v1
    Checksum:i7EE5757BAB849216
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000479 Genomic DNA. Translation: ABK68595.1.
    RefSeqiYP_879649.1. NC_008595.1.

    Genome annotation databases

    EnsemblBacteriaiABK68595; ABK68595; MAV_0362.
    GeneIDi4526254.
    KEGGimav:MAV_0362.
    PATRICi17982468. VBIMycAvi38287_0351.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000479 Genomic DNA. Translation: ABK68595.1 .
    RefSeqi YP_879649.1. NC_008595.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243243.MAV_0362.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABK68595 ; ABK68595 ; MAV_0362 .
    GeneIDi 4526254.
    KEGGi mav:MAV_0362.
    PATRICi 17982468. VBIMycAvi38287_0351.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi FHPWPVR.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci MAVI243243:GH3Y-362-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 104Imported.

    Entry informationi

    Entry nameiA0Q9R1_MYCA1
    AccessioniPrimary (citable) accession number: A0Q9R1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3