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A0Q9R0

- A0Q9R0_MYCA1

UniProt

A0Q9R0 - A0Q9R0_MYCA1

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Protein
Submitted name:

DNA ligase

Gene

MAV_0360

Organism
Mycobacterium avium (strain 104)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMAVI243243:GH3Y-361-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:MAV_0360Imported
OrganismiMycobacterium avium (strain 104)Imported
Taxonomic identifieri243243 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000001574: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243243.MAV_0360.

Structurei

3D structure databases

ProteinModelPortaliA0Q9R0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0Q9R0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPPVSPMLAK SVGAIPPAAS YEPKWDGFRS ICFRDGDEVE LGSRNERPMT
60 70 80 90 100
RYFPELVAAV RAELPQRCVI DGEIVIATDH GLDFEALQQR IHPAESRVRM
110 120 130 140 150
LAEATPASFI AFDLLALGDE DYTGRPFRER RAALLEAVGG PGPSIHVTPA
160 170 180 190 200
TTDLDTARRW FDEFEGAGLD GVVAKPLDIT YQPDKRVMFK IKHERTADCV
210 220 230 240 250
VAGYRVHKSG ADAIGSLLLG LYQDDGQLAS VGVIGAFPMA ERRRLFTELQ
260 270 280 290 300
PLVTDFEDHP WNWAAHQAGE RTPRKNEFSR WNAGKDLSFV PLRPERVVEV
310 320 330 340 350
RYDHMEGRRF RHTAQFNRWR PDRDPRSCTY EQLEQPVTFR LGDIVPGLGA
360
SRADHKPGKQ IGAP
Length:364
Mass (Da):40,809
Last modified:January 9, 2007 - v1
Checksum:i3BB027CD1483D9BC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000479 Genomic DNA. Translation: ABK65986.1.
RefSeqiYP_879648.1. NC_008595.1.

Genome annotation databases

EnsemblBacteriaiABK65986; ABK65986; MAV_0360.
GeneIDi4525884.
KEGGimav:MAV_0360.
PATRICi17982466. VBIMycAvi38287_0350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000479 Genomic DNA. Translation: ABK65986.1 .
RefSeqi YP_879648.1. NC_008595.1.

3D structure databases

ProteinModelPortali A0Q9R0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243243.MAV_0360.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK65986 ; ABK65986 ; MAV_0360 .
GeneIDi 4525884.
KEGGi mav:MAV_0360.
PATRICi 17982466. VBIMycAvi38287_0350.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci MAVI243243:GH3Y-361-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 104Imported.

Entry informationi

Entry nameiA0Q9R0_MYCA1
AccessioniPrimary (citable) accession number: A0Q9R0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: October 1, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3