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A0Q9R0

- A0Q9R0_MYCA1

UniProt

A0Q9R0 - A0Q9R0_MYCA1

Protein
Submitted name:

DNA ligase

Gene

MAV_0360

Organism
Mycobacterium avium (strain 104)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMAVI243243:GH3Y-361-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:MAV_0360Imported
    OrganismiMycobacterium avium (strain 104)Imported
    Taxonomic identifieri243243 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
    ProteomesiUP000001574: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi243243.MAV_0360.

    Structurei

    3D structure databases

    ProteinModelPortaliA0Q9R0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0Q9R0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPVSPMLAK SVGAIPPAAS YEPKWDGFRS ICFRDGDEVE LGSRNERPMT    50
    RYFPELVAAV RAELPQRCVI DGEIVIATDH GLDFEALQQR IHPAESRVRM 100
    LAEATPASFI AFDLLALGDE DYTGRPFRER RAALLEAVGG PGPSIHVTPA 150
    TTDLDTARRW FDEFEGAGLD GVVAKPLDIT YQPDKRVMFK IKHERTADCV 200
    VAGYRVHKSG ADAIGSLLLG LYQDDGQLAS VGVIGAFPMA ERRRLFTELQ 250
    PLVTDFEDHP WNWAAHQAGE RTPRKNEFSR WNAGKDLSFV PLRPERVVEV 300
    RYDHMEGRRF RHTAQFNRWR PDRDPRSCTY EQLEQPVTFR LGDIVPGLGA 350
    SRADHKPGKQ IGAP 364
    Length:364
    Mass (Da):40,809
    Last modified:January 9, 2007 - v1
    Checksum:i3BB027CD1483D9BC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000479 Genomic DNA. Translation: ABK65986.1.
    RefSeqiYP_879648.1. NC_008595.1.

    Genome annotation databases

    EnsemblBacteriaiABK65986; ABK65986; MAV_0360.
    GeneIDi4525884.
    KEGGimav:MAV_0360.
    PATRICi17982466. VBIMycAvi38287_0350.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000479 Genomic DNA. Translation: ABK65986.1 .
    RefSeqi YP_879648.1. NC_008595.1.

    3D structure databases

    ProteinModelPortali A0Q9R0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243243.MAV_0360.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABK65986 ; ABK65986 ; MAV_0360 .
    GeneIDi 4525884.
    KEGGi mav:MAV_0360.
    PATRICi 17982466. VBIMycAvi38287_0350.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci MAVI243243:GH3Y-361-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 104Imported.

    Entry informationi

    Entry nameiA0Q9R0_MYCA1
    AccessioniPrimary (citable) accession number: A0Q9R0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3