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A0Q9R0

- A0Q9R0_MYCA1

UniProt

A0Q9R0 - A0Q9R0_MYCA1

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Protein
Submitted name: DNA ligase
Gene
MAV_0360
Organism
Mycobacterium avium (strain 104)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMAVI243243:GH3Y-361-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:MAV_0360Imported
OrganismiMycobacterium avium (strain 104)Imported
Taxonomic identifieri243243 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000001574: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243243.MAV_0360.

Structurei

3D structure databases

ProteinModelPortaliA0Q9R0.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0Q9R0-1 [UniParc]FASTAAdd to Basket

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MPPVSPMLAK SVGAIPPAAS YEPKWDGFRS ICFRDGDEVE LGSRNERPMT    50
RYFPELVAAV RAELPQRCVI DGEIVIATDH GLDFEALQQR IHPAESRVRM 100
LAEATPASFI AFDLLALGDE DYTGRPFRER RAALLEAVGG PGPSIHVTPA 150
TTDLDTARRW FDEFEGAGLD GVVAKPLDIT YQPDKRVMFK IKHERTADCV 200
VAGYRVHKSG ADAIGSLLLG LYQDDGQLAS VGVIGAFPMA ERRRLFTELQ 250
PLVTDFEDHP WNWAAHQAGE RTPRKNEFSR WNAGKDLSFV PLRPERVVEV 300
RYDHMEGRRF RHTAQFNRWR PDRDPRSCTY EQLEQPVTFR LGDIVPGLGA 350
SRADHKPGKQ IGAP 364
Length:364
Mass (Da):40,809
Last modified:January 9, 2007 - v1
Checksum:i3BB027CD1483D9BC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000479 Genomic DNA. Translation: ABK65986.1.
RefSeqiYP_879648.1. NC_008595.1.

Genome annotation databases

EnsemblBacteriaiABK65986; ABK65986; MAV_0360.
GeneIDi4525884.
KEGGimav:MAV_0360.
PATRICi17982466. VBIMycAvi38287_0350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000479 Genomic DNA. Translation: ABK65986.1 .
RefSeqi YP_879648.1. NC_008595.1.

3D structure databases

ProteinModelPortali A0Q9R0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243243.MAV_0360.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK65986 ; ABK65986 ; MAV_0360 .
GeneIDi 4525884.
KEGGi mav:MAV_0360.
PATRICi 17982466. VBIMycAvi38287_0350.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci MAVI243243:GH3Y-361-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 104Imported.

Entry informationi

Entry nameiA0Q9R0_MYCA1
AccessioniPrimary (citable) accession number: A0Q9R0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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