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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Francisella tularensis subsp. novicida (strain U112)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:FTN_1583Imported
OrganismiFrancisella tularensis subsp. novicida (strain U112)Imported
Taxonomic identifieri401614 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
Proteomesi
  • UP000000762 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei40 – 59HelicalSequence analysisAdd BLAST20
Transmembranei80 – 105HelicalSequence analysisAdd BLAST26
Transmembranei139 – 160HelicalSequence analysisAdd BLAST22
Transmembranei172 – 199HelicalSequence analysisAdd BLAST28
Transmembranei227 – 248HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliA0Q878.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.

Sequencei

Sequence statusi: Complete.

A0Q878-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTACMAELI GTMLLILLGN GVVAGVVLNK TKAHNSGWIV ITFAWGLAVF
60 70 80 90 100
IGVLVAGPIS GAHLNPVVTL SLALAGKFSW AWVLPFIISQ IIGAMLGQLL
110 120 130 140 150
VWIMYYPHYS ATDNPELKLA TCCTSPAIKH LPANFASEVI GTFVLVLAIL
160 170 180 190 200
TMHGVVLHVG DSSITTTYPV DMGALGGIPV AFVVVVIGMS LGGTTGYAIN
210 220 230 240 250
PARDFGPRLF HAIMPIQGKG SSQWSYAWVP ILGPVCGSII ATAFYLLLKV

KGVF
Length:254
Mass (Da):26,748
Last modified:January 9, 2007 - v1
Checksum:i55D9FD7B6DCD7B88
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000439 Genomic DNA. Translation: ABK90443.1.
RefSeqiWP_003041109.1. NZ_CP009633.1.

Genome annotation databases

EnsemblBacteriaiABK90443; ABK90443; FTN_1583.
KEGGiftn:FTN_1583.
ftx:AW25_414.
PATRICi17936339. VBIFraNov128299_1613.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000439 Genomic DNA. Translation: ABK90443.1.
RefSeqiWP_003041109.1. NZ_CP009633.1.

3D structure databases

ProteinModelPortaliA0Q878.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK90443; ABK90443; FTN_1583.
KEGGiftn:FTN_1583.
ftx:AW25_414.
PATRICi17936339. VBIFraNov128299_1613.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA0Q878_FRATN
AccessioniPrimary (citable) accession number: A0Q878
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: November 2, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.