Reviewed, UniProtKB/Swiss-Prot A0Q3B8 (MURI_CLONN)

Names and origin

Protein names

Recommended name:
    Glutamate racemase
    EC=5.1.1.3

Gene names

Name:	murI
Ordered Locus Names:	NT01CX_0654

Organism

Clostridium novyi (strain NT) [Complete proteome] [HAMAP]

Taxonomic identifier

386415 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	259 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity.
Catalytic activity	L-glutamate = D-glutamate. HAMAP MF_00258
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258
Sequence similarities	Belongs to the aspartate/glutamate racemases family.

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation Peptidoglycan synthesis
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: HAMAP regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 259	259	Glutamate racemase HAMAP MF_00258		PRO_1000047559

Sequences

	Sequence		Length	Mass (Da)
	A0Q3B8-1 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 3A92932BB586DCA0	FASTA	259	28,560
	10 20 30 40 50 60 MDITKMPIGF FDSGVGGLSV LREAIKVLPN EDFIYFGDSK NAPYGTKTVD EVKKLTFNAV 70 80 90 100 110 120 EFLLGHNVKA VVIACNTATS AAIEDLRNSY KDIPIIGIEP ALKPAVELNK KGKIVVMATP 130 140 150 160 170 180 MTLAEKKFND LMAKYKGRSE MVSLPCPGLV EYVEKGIVKG QELNNYLQKK LSIIDKKEIS 190 200 210 220 230 240 SVVLGCTHYP FIKEELSKIL GEDVVIIDGS LGTSIQLKRK LIKNKSLNLQ DKKGTVKIFN 250 SLDNNEEIIK ISKKLLGII

References

[1]

"The genome and transcriptomes of the anti-tumor agent Clostridium novyi-NT." Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., Zhang X., Diaz L.A. Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., Vogelstein B., Zhou S. Nat. Biotechnol. 24:1573-1580(2006) [PubMed: 17115055] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000382 Genomic DNA. Translation: ABK62576.1.
RefSeq	YP_879120.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A0Q3B8.
Genome annotation databases
GeneID	4540265.
GenomeReviews	Gene locus NT01CX_0654 in contig CP000382_GR.
KEGG	cno:NT01CX_0654.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	HYTHELI.
Family and domain databases
HAMAP	MF_00258. [Tree]
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
TIGRFAMs	TIGR00067. glut_race. 1 hit.
PROSITE	PS00923. ASP_GLU_RACEMASE_1. 1 hit. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

MURI_CLONN

Accession

Primary (citable) accession number: A0Q3B8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	January 9, 2007
Last modified:	November 3, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)