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Protein
Submitted name:

GGDEF domain protein, putative

Gene

NT01CX_0237

Organism
Clostridium novyi (strain NT)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. protein kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCNOV386415:GH98-1804-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GGDEF domain protein, putativeImported
Gene namesi
Ordered Locus Names:NT01CX_0237Imported
OrganismiClostridium novyi (strain NT)Imported
Taxonomic identifieri386415 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000008220 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi386415.NT01CX_0237.

Structurei

3D structure databases

ProteinModelPortaliA0Q289.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2199.
OMAiNYYYESI.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
3.40.50.300. 2 hits.
InterProiIPR000160. GGDEF_dom.
IPR011009. Kinase-like_dom.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR000719. Prot_kinase_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF56112. SSF56112. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0Q289-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELINNKYKI IKKIEQNRKS SSYAVQDIVD NKIRKLIIIN SDYLSKTLIN
60 70 80 90 100
FLINNFTDLS NVETEGILKV FNFGLVSSID NKRLAYKQYY YTSEYLKDYY
110 120 130 140 150
KANDLIENLS YKEIIDVYVQ VCMAINYLNL RGIKYEEINL ENILLYKKDN
160 170 180 190 200
KLKVKLMDLV TLEVESSYLK GEIKGGLIFK APEILNGDNP TIESEIYSLG
210 220 230 240 250
VLAVILFFIK NNIKVDFKTD VYSTINDNLL EFDQLYLNEK IKKIIKIIKK
260 270 280 290 300
MISNNPKDRY HNINKMVHDM NKVLGTNYAP YNISEIEKIN VNTPVVDREY
310 320 330 340 350
ELKTIISEYR FMKEKHGENK CIFVHGETGI GKTKILKEVE RILSLDGVSV
360 370 380 390 400
YSTFPSSNNG RNKNLIEFCK KIIYSCRESI GETYKEEFEK FIPQTEEDKN
410 420 430 440 450
FISLESMCSF HEKVRLFKIS ENFIKEVFKE KSSVIIIDNI SVFKKISLEA
460 470 480 490 500
LEYVYNSESI KNLIIILSYN EEDLLEPGFF NFINRMNKNN STINIPLKGL
510 520 530 540 550
SFEGTACLIE KLLGLSEYPI KFSKKIYSET YGNPLFIEET IKNLLLNEII
560 570 580 590 600
YVEEETGKWD IAYNGDYDSL PMPKSIEQAF VSELNKIGAE SYFILEFISI
610 620 630 640 650
FTDGVSQKII EEFMKKDGLN YDDIIEDLTS KGILCRKIED AGFVYDFCSK
660 670 680 690 700
ILKDLVYEKI DEKVEMHREA GELLIKCGEN NIENREEVIY HLERSNQNIR
710 720 730 740 750
AVEYYIENAS KMILLRNHRE ALFNLKKASQ LLPYRYNDEK TRILLKMADI
760 770 780 790 800
YMDLFKFKSA KKILQSAKNI VLETKNKKDE IDVLNREGNI YLNENNYIMA
810 820 830 840 850
FEKINLVDEI LKEIEYKKGF IDSRIILANI YYKKDEYDKV VDTCNEGIIV
860 870 880 890 900
CGNEFIKPKV VLYNIRGNGN RYLKNFDEAV RDYGLVYKNS KSTDYKKGIV
910 920 930 940 950
FAYINLAKIY EDYYQISDIS EEYLMKVTDI CEKNKFLYYE IVALQKLGEV
960 970 980 990 1000
YNRRFEYEKA LKIFKDALFK AECIEYKNGI VESLSYIGIL QLKLSNYKAV
1010 1020 1030 1040 1050
FKNLNLVEKY IERNKSSIEN IHQYYLLKGE ILIELGLLKE AKEYLIKALK
1060 1070 1080 1090 1100
AYEKEESLLK LKIKELLVFI KLLDEYGEID LEEYIEYIKN MASNYKNYSN
1110 1120 1130 1140 1150
KVDYIYSCAI ILYEQGYIKY ALRLVEYISQ DNWISVSECV KFKEMYFKGL
1160 1170 1180 1190 1200
MFNDDEKLAF LYEALKLVKA LKNKKIECNI YIKLGDYFNE NGQYNFAAYY
1210 1220 1230 1240 1250
YFEACEIIRV ITEQIPSQYR LKYFKFNNFI KPFEKINFIK HEYFENKIYD
1260 1270 1280 1290 1300
EQLYKKMNVA SEKDLKEVLQ FKKFIKLLDN KKFMKSMGKI YNEFFSIKIK
1310 1320 1330 1340 1350
HQKDIISKLQ CDSIKNLKLI IQYIASKTLA TEAEIVIEDG VNNFKTIASL
1360 1370 1380 1390 1400
TGNDIREENK EIIERVKKTK STFYVFNNEV YFTNFKYKAS MDCKRSFMCI
1410 1420 1430 1440 1450
PIMSYPTENL NFNEEKRHIK INATINGYIY ISSNKFLNSI NQNTLEEIMK
1460 1470 1480 1490 1500
LINLIAYIID KYQLTISCSI DKLTGAYTRK YLEDKLSESI ECANFNNDKF
1510 1520 1530 1540 1550
SIIMFDLDHF KNVNDTFGHQ VGDKVLNNVC GIVMKNLRDG DICGRYGGEE
1560 1570 1580 1590 1600
FISILPGIGE SKALNIAERI RSAVEDSKIL GEKHPVTISI GISTYPQQAQ
1610 1620 1630 1640 1650
LKRELIEKAD QALYIAKDSG RNRCKVWKKE FENKVKVTSK LTGIISGNFA
1660 1670 1680 1690 1700
QDSRNVLAMI ELMDIVNSDL KFEQKVYKAL GHITGITEAE YGNLIFLSND
1710 1720 1730 1740 1750
NKIKENFGRK KLQEDWSYEY VCNKKILQDV INQKQGTCIM EWNETFNSDL
1760 1770 1780 1790 1800
LTVLPEWYSV MVVPIINKNV MKAILYLAIP SKIKKFTREE LNFVTILSKI

MKDI
Length:1,804
Mass (Da):211,274
Last modified:January 9, 2007 - v1
Checksum:i5341A40078104D05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA. Translation: ABK61367.1.
RefSeqiWP_011722729.1. NC_008593.1.
YP_878741.1. NC_008593.1.

Genome annotation databases

EnsemblBacteriaiABK61367; ABK61367; NT01CX_0237.
GeneIDi4540547.
KEGGicno:NT01CX_0237.
PATRICi19481024. VBICloNov112828_1777.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA. Translation: ABK61367.1.
RefSeqiWP_011722729.1. NC_008593.1.
YP_878741.1. NC_008593.1.

3D structure databases

ProteinModelPortaliA0Q289.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386415.NT01CX_0237.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK61367; ABK61367; NT01CX_0237.
GeneIDi4540547.
KEGGicno:NT01CX_0237.
PATRICi19481024. VBICloNov112828_1777.

Phylogenomic databases

eggNOGiCOG2199.
OMAiNYYYESI.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciCNOV386415:GH98-1804-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
3.40.50.300. 2 hits.
InterProiIPR000160. GGDEF_dom.
IPR011009. Kinase-like_dom.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR000719. Prot_kinase_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF56112. SSF56112. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NTImported.

Entry informationi

Entry nameiA0Q289_CLONN
AccessioniPrimary (citable) accession number: A0Q289
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: April 1, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.