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A0Q1B1 (A0Q1B1_CLONN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NT01CX_2340 EMBL ABK61341.1
OrganismClostridium novyi (strain NT) [Complete proteome] [HAMAP] EMBL ABK61341.1
Taxonomic identifier386415 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length589 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0Q1B1 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: 5A1180AE81CFE417

FASTA58966,271
        10         20         30         40         50         60 
MFNKTEKQNN KLRKSFFKSY IRFFYLIVLA VVIIATASFK IAKNSLYDLG ERELKNRIQL 

        70         80         90        100        110        120 
GLIIMDSLEQ EVKQGGLSRD AAQEIFRKEM LNPKKKDGKT RGINKNIDLK VDAYMYAINS 

       130        140        150        160        170        180 
EGLEMMHPFK EGENISSIQD SNGNNVVKLI IDEGKNPKND GIIHFGWKNP NDIKERAKVN 

       190        200        210        220        230        240 
AVGYFEPWDW YINIGCYEEA FYKPVYKILT YISLIALITI ILSIILIWYS MNKKINPLGH 

       250        260        270        280        290        300 
ILSSMEMVSE GNINANINIK RKDEIGYIAK VFNNMLEEIK SMILEIKHIS FALEEKAVII 

       310        320        330        340        350        360 
NSSTNSTLEN SNAINKAMES IASSISNSTK EMQNSFESMQ LLGDDIEVIR ENSINIRKEA 

       370        380        390        400        410        420 
SSANKLNENI ISILTGLEER SGENIKVSNE TKENIQSLLE KSNNIVGIVS TIEQISNQIN 

       430        440        450        460        470        480 
LLALNASIES ARAGDAGRGF AVVADEIKKL SSETSDAVQE INNLIKELLE AINVSVMSTE 

       490        500        510        520        530        540 
KSSDVAEGQI KTINETRKIL GRVVRFIQNM PDIIGKNVEK IEEAYKKKDS VNNSMNSVLV 

       550        560        570        580 
LVEEMSSSSE EVYASTSEVK EKMNYAKGLS EELNSLSKNL KESINKFEI 

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References

[1]"The genome and transcriptomes of the anti-tumor agent Clostridium novyi-NT."
Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., Zhang X., Diaz L.A.Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., Vogelstein B., Zhou S.
Nat. Biotechnol. 24:1573-1580(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NT EMBL ABK61341.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000382 Genomic DNA. Translation: ABK61341.1.
RefSeqYP_878413.1. NC_008593.1.

3D structure databases

ProteinModelPortalA0Q1B1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING386415.NT01CX_2340.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK61341; ABK61341; NT01CX_2340.
GeneID4540856.
KEGGcno:NT01CX_2340.
PATRIC19480348. VBICloNov112828_1444.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000058556.
KOK03406.
OMAFEPWDWY.
OrthoDBEOG6QK4NQ.

Enzyme and pathway databases

BioCycCNOV386415:GH98-1472-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0Q1B1_CLONN
AccessionPrimary (citable) accession number: A0Q1B1
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)