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A0Q140 (URK_CLONN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uridine kinase

EC=2.7.1.48
Alternative name(s):
Cytidine monophosphokinase
Uridine monophosphokinase
Gene names
Name:udk
Ordered Locus Names:NT01CX_2269
OrganismClostridium novyi (strain NT) [Complete proteome] [HAMAP]
Taxonomic identifier386415 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length208 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processCTP salvage

Inferred from electronic annotation. Source: UniProtKB-UniPathway

UMP salvage

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

phosphotransferase activity, alcohol group as acceptor

Inferred from electronic annotation. Source: InterPro

uridine kinase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 208208Uridine kinase HAMAP-Rule MF_00551
PRO_1000200512

Regions

Nucleotide binding11 – 188ATP Potential

Sequences

Sequence LengthMass (Da)Tools
A0Q140 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: FE54519BBBA38E99

FASTA20823,908
        10         20         30         40         50         60 
MMRPILIGIT GGTGSGKSTV ANEIYESFKD DCIAIIEQDS YYKDQSHLTF EDRIKTNYDH 

        70         80         90        100        110        120 
PNAFDTELLV EHLKELSKGN TINKPIYDFK EHTRKKEVVE VKAKDIIIVE GIMILQDVEL 

       130        140        150        160        170        180 
RNLLDIKIYV DTDDDVRIIR RILRDIKERG RTIDSVVDQY LGVVKPMHSQ FIEPTKKYAD 

       190        200 
IIIPEGGQNK VAIDIMVSKI KQILSENK 

« Hide

References

[1]"The genome and transcriptomes of the anti-tumor agent Clostridium novyi-NT."
Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., Zhang X., Diaz L.A. Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., Vogelstein B., Zhou S.
Nat. Biotechnol. 24:1573-1580(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NT.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000382 Genomic DNA. Translation: ABK61121.1.
RefSeqYP_878342.1. NC_008593.1.

3D structure databases

ProteinModelPortalA0Q140.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING386415.NT01CX_2269.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK61121; ABK61121; NT01CX_2269.
GeneID4541853.
KEGGcno:NT01CX_2269.
PATRIC19480204. VBICloNov112828_1372.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0572.
HOGENOMHOG000262756.
KOK00876.
OMADICFMRR.
OrthoDBEOG6KMBCH.
ProtClustDBPRK05480.

Enzyme and pathway databases

BioCycCNOV386415:GH98-1401-MONOMER.
UniPathwayUPA00574; UER00637.
UPA00579; UER00640.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00551. Uridine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR006083. PRK/URK.
IPR000764. Uridine_kinase.
[Graphical view]
PfamPF00485. PRK. 1 hit.
[Graphical view]
PRINTSPR00988. URIDINKINASE.
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00235. udk. 1 hit.
ProtoNetSearch...

Entry information

Entry nameURK_CLONN
AccessionPrimary (citable) accession number: A0Q140
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: January 9, 2007
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways