A0Q0M0 (A0Q0M0_CLONN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 25 EMBL ABK60795.1
EC=3.2.1.17 EMBL ABK60795.1

Gene names

Ordered Locus Names:

NT01CX_2099

Organism

Clostridium novyi (strain NT) [Complete proteome] [HAMAP]

Taxonomic identifier

386415 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	323 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABK60795.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0Q0M0 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 1FD7685454D188AA	FASTA	323	37,200
	10 20 30 40 50 60 MQCASNKIIN GIDISNWQSG INYDKLKRNT EVVIIKATEG VDFIDKMFLT HYNGCKTAGL 70 80 90 100 110 120 KIGFYHFFSD KSNPTKQARD FWNTIKNKKM HVIPVLDIET SKRSKTEVTN RCLEFLKEME 130 140 150 160 170 180 RLSGFKCIIY TYTSFAIEKL DKRLSSYPLW IAHYGVASPH NNGIWNKWVG FQYTDKARIE 190 200 210 220 230 240 GVPNTCDANK FTPYIFINSD FKVPQNNSII QEKPLWQLSI SGDIVKDLQR ELNRQFNKGL 250 260 270 280 290 300 KVDGYFGNST LNACILVRRG ARGNITKIIQ QRLIDKGYYV GIYKADGVFR NDTELAVKKF 310 320 QKNNNLKVDG IVGIETWKAL FKK

References

[1]

"The genome and transcriptomes of the anti-tumor agent Clostridium novyi-NT." Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., Zhang X., Diaz L.A. Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., Vogelstein B., Zhou S. Nat. Biotechnol. 24:1573-1580(2006) [PubMed: 17115055] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000382 Genomic DNA. Translation: ABK60795.1.
RefSeq	YP_878172.1. NC_008593.1.
3D structure databases
ProteinModelPortal	A0Q0M0.
ModBase	Search...
Protein-protein interaction databases
STRING	A0Q0M0.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4541915.
GenomeReviews	Gene locus NT01CX_2099 in contig CP000382_GR.
KEGG	cno:NT01CX_2099.
PATRIC	19479868. VBICloNov112828_1204.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG417455.
OMA	FINNANG.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR002477. Peptidoglycan-bd-like. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:1.10.101.10. PGBD_1. 1 hit.
KO	K01185.
Pfam	PF01183. Glyco_hydro_25. 1 hit. PF01471. PG_binding_1. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF47090. PGBD_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0Q0M0_CLONN

Accession

Primary (citable) accession number: A0Q0M0

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)