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Protein
Submitted name:

Membrane associated methyl-accepting chemotaxis protein with HAMP domain

Gene

NT01CX_1196

Organism
Clostridium novyi (strain NT)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCNOV386415:GH98-328-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Membrane associated methyl-accepting chemotaxis protein with HAMP domainImported
Gene namesi
Ordered Locus Names:NT01CX_1196Imported
OrganismiClostridium novyi (strain NT)Imported
Taxonomic identifieri386415 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000008220: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi386415.NT01CX_1196.

Structurei

3D structure databases

ProteinModelPortaliA0PY27.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000055361.
OMAiARARTIM.
OrthoDBiEOG6MM1GV.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0PY27-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDFLKKISVK KKMIFSYSAL LMLMIISGVI GVVSAKKLND NSKQMYFKSL
60 70 80 90 100
QSIEYIQEIK NNIDEEATCI LNIIYNEDLN QNDRNNIYKH ITVDLKNKNQ
110 120 130 140 150
ELFEKYEKIP FTEEEKRDYN EFKHELENYR NVRGDILTLV NNGNINGAKQ
160 170 180 190 200
IFASKIKPIR EKTESKLNAI NDMNETQAKI SDEENRKVFQ NIIFISSAVT
210 220 230 240 250
IVGIILALVL AIIMIRDIIS SLNRIRAYAR RLSEYDFSTP IVVRGTDELC
260 270 280 290 300
MTAVDLNSAQ KNVNNLVKQI YLDAETMGAM SEELSATVEE ITSKVITIDE
310 320 330 340 350
ATKEINKGIE EFSASTEELN ASVEEVNSSI EELATSSTEG SNNSNVAKGK
360 370 380 390 400
AKEVQEYLQD AIKETNSIYE ERQQKIIKAI EDGKVVSEIR VMADSIAQIA
410 420 430 440 450
EQTNLLALNA AIEAARAGEQ GKGFAVVADE IRKLAEQSAE SVLVIKNTIT
460 470 480 490 500
QVQSAFGNLS DNGNQLLDFM NTKVKELLDS SLSVSKQYYD DSDYISTMTE
510 520 530 540 550
NFASMTEEIN ATTNQITGAV QNIALGAQDA AEHTGDILSG IDETTKAMNE
560 570
IAKTSENQAS IAQKLNELVG KFKI
Length:574
Mass (Da):63,994
Last modified:January 9, 2007 - v1
Checksum:i60C14B0E43992AB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA. Translation: ABK61393.1.
RefSeqiWP_011721287.1. NC_008593.1.
YP_877279.1. NC_008593.1.

Genome annotation databases

EnsemblBacteriaiABK61393; ABK61393; NT01CX_1196.
GeneIDi4540434.
KEGGicno:NT01CX_1196.
PATRICi19478056. VBICloNov112828_0307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA. Translation: ABK61393.1.
RefSeqiWP_011721287.1. NC_008593.1.
YP_877279.1. NC_008593.1.

3D structure databases

ProteinModelPortaliA0PY27.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386415.NT01CX_1196.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK61393; ABK61393; NT01CX_1196.
GeneIDi4540434.
KEGGicno:NT01CX_1196.
PATRICi19478056. VBICloNov112828_0307.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000055361.
OMAiARARTIM.
OrthoDBiEOG6MM1GV.

Enzyme and pathway databases

BioCyciCNOV386415:GH98-328-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NTImported.

Entry informationi

Entry nameiA0PY27_CLONN
AccessioniPrimary (citable) accession number: A0PY27
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: January 7, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.