Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A0PVP8

- A0PVP8_MYCUA

UniProt

A0PVP8 - A0PVP8_MYCUA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP dependent DNA ligase

Gene

MUL_4434

Organism
Mycobacterium ulcerans (strain Agy99)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MUL_4434Imported
OrganismiMycobacterium ulcerans (strain Agy99)Imported
Taxonomic identifieri362242 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000765: Chromosome

Organism-specific databases

GenoListiMUL_4434.

Interactioni

Protein-protein interaction databases

STRINGi362242.MUL_4434.

Structurei

3D structure databases

ProteinModelPortaliA0PVP8.
SMRiA0PVP8. Positions 16-302, 464-770.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0PVP8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGSAQAWPPG QANGPQVTLT NADKVLYPAT GTTKSDVFGY YTGIAEVMIP
60 70 80 90 100
HIAGRPATRK RWPNGVDQAS FFEKQLASSA PDWLPRASVV HRSGTTTYPI
110 120 130 140 150
IDSATGLAWI AQQAALEVHV PQWRFVAEWT SKGEILTPGP ATRLVFDLDP
160 170 180 190 200
GEGVTMAQLA QVARAVRDLL ADIGLSTLPL TSGSKGLHFY TPLDEPVSSK
210 220 230 240 250
GATVLAKRVA QQLETVMPAL VTATMTKSLR AGKVFLDWSQ NSGSKTTIAP
260 270 280 290 300
YSLRGREQPT VAAPRSWEEL DDPGLRQLTY DEVLARLTRD GDLIAALDAD
310 320 330 340 350
LPGDDRLLKY RSMRNASKTP EPVPRARPVV GQGNTFVIQE HHARRLHDDF
360 370 380 390 400
RLERDGVLVS WAVPKNLPET TSVNHLAVHT EDHPLEYATF EGNIPKGEYG
410 420 430 440 450
AGKVIIWDSG TYDTEKFRDD SRNGAEKGEV IVNLHGSRIS GRYALIQTNG
460 470 480 490 500
DQWLAHRMKD QTAFDFDTLA PMLTSHGSVA GLESGQWAFE GKWDGYRLLV
510 520 530 540 550
EADHGALRLR SRSGRDVTTE YPQLRSLAAD LADHHVVLDG ELVALDSSGV
560 570 580 590 600
PSFNEMQNRV RATRIEFWAF DLLFLDGRSL LRARYRDRRK LLETLGSAGN
610 620 630 640 650
LIVPELLPGD GAEALAYSHK RGWEGVIAKR RDSGYQPGRR SSAWIKDKHW
660 670 680 690 700
NTQEVVIGGW RVGEGGRSSG IGSLLMGIPG PSGLHFAGRV GTGFTERDLA
710 720 730 740 750
NLKKTLAPLH TDESPFDAAL PAREAKGVTF VVPTLVGEVR YSEWTPDDRL
760 770
RQSSWRGLRP DKNPSEVVRE
Length:770
Mass (Da):84,666
Last modified:January 9, 2007 - v1
Checksum:i862DFB49A646BA06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000325 Genomic DNA. Translation: ABL06417.1.
RefSeqiWP_011742018.1. NC_008611.1.
YP_907888.1. NC_008611.1.

Genome annotation databases

EnsemblBacteriaiABL06417; ABL06417; MUL_4434.
GeneIDi4550222.
KEGGimul:MUL_4434.
PATRICi18176673. VBIMycUlc37413_5139.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000325 Genomic DNA. Translation: ABL06417.1 .
RefSeqi WP_011742018.1. NC_008611.1.
YP_907888.1. NC_008611.1.

3D structure databases

ProteinModelPortali A0PVP8.
SMRi A0PVP8. Positions 16-302, 464-770.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 362242.MUL_4434.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL06417 ; ABL06417 ; MUL_4434 .
GeneIDi 4550222.
KEGGi mul:MUL_4434.
PATRICi 18176673. VBIMycUlc37413_5139.

Organism-specific databases

GenoListi MUL_4434.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer."
    Stinear T.P., Seemann T., Pidot S., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J., Johnson P.D.R., Davies J.K., Jenkin G.A., Small P.L.C., Jones L.M.
    , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T.
    Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Agy99Imported.

Entry informationi

Entry nameiA0PVP8_MYCUA
AccessioniPrimary (citable) accession number: A0PVP8
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: October 1, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3