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A0PVP8

- A0PVP8_MYCUA

UniProt

A0PVP8 - A0PVP8_MYCUA

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Protein
Submitted name: ATP dependent DNA ligase
Gene
MUL_4434
Organism
Mycobacterium ulcerans (strain Agy99)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MUL_4434Imported
OrganismiMycobacterium ulcerans (strain Agy99)Imported
Taxonomic identifieri362242 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000000765: Chromosome

Organism-specific databases

GenoListiMUL_4434.

Interactioni

Protein-protein interaction databases

STRINGi362242.MUL_4434.

Structurei

3D structure databases

ProteinModelPortaliA0PVP8.
SMRiA0PVP8. Positions 16-302, 464-770.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0PVP8-1 [UniParc]FASTAAdd to Basket

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MGSAQAWPPG QANGPQVTLT NADKVLYPAT GTTKSDVFGY YTGIAEVMIP    50
HIAGRPATRK RWPNGVDQAS FFEKQLASSA PDWLPRASVV HRSGTTTYPI 100
IDSATGLAWI AQQAALEVHV PQWRFVAEWT SKGEILTPGP ATRLVFDLDP 150
GEGVTMAQLA QVARAVRDLL ADIGLSTLPL TSGSKGLHFY TPLDEPVSSK 200
GATVLAKRVA QQLETVMPAL VTATMTKSLR AGKVFLDWSQ NSGSKTTIAP 250
YSLRGREQPT VAAPRSWEEL DDPGLRQLTY DEVLARLTRD GDLIAALDAD 300
LPGDDRLLKY RSMRNASKTP EPVPRARPVV GQGNTFVIQE HHARRLHDDF 350
RLERDGVLVS WAVPKNLPET TSVNHLAVHT EDHPLEYATF EGNIPKGEYG 400
AGKVIIWDSG TYDTEKFRDD SRNGAEKGEV IVNLHGSRIS GRYALIQTNG 450
DQWLAHRMKD QTAFDFDTLA PMLTSHGSVA GLESGQWAFE GKWDGYRLLV 500
EADHGALRLR SRSGRDVTTE YPQLRSLAAD LADHHVVLDG ELVALDSSGV 550
PSFNEMQNRV RATRIEFWAF DLLFLDGRSL LRARYRDRRK LLETLGSAGN 600
LIVPELLPGD GAEALAYSHK RGWEGVIAKR RDSGYQPGRR SSAWIKDKHW 650
NTQEVVIGGW RVGEGGRSSG IGSLLMGIPG PSGLHFAGRV GTGFTERDLA 700
NLKKTLAPLH TDESPFDAAL PAREAKGVTF VVPTLVGEVR YSEWTPDDRL 750
RQSSWRGLRP DKNPSEVVRE 770
Length:770
Mass (Da):84,666
Last modified:January 9, 2007 - v1
Checksum:i862DFB49A646BA06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000325 Genomic DNA. Translation: ABL06417.1.
RefSeqiWP_011742018.1. NC_008611.1.
YP_907888.1. NC_008611.1.

Genome annotation databases

EnsemblBacteriaiABL06417; ABL06417; MUL_4434.
GeneIDi4550222.
KEGGimul:MUL_4434.
PATRICi18176673. VBIMycUlc37413_5139.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000325 Genomic DNA. Translation: ABL06417.1 .
RefSeqi WP_011742018.1. NC_008611.1.
YP_907888.1. NC_008611.1.

3D structure databases

ProteinModelPortali A0PVP8.
SMRi A0PVP8. Positions 16-302, 464-770.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 362242.MUL_4434.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL06417 ; ABL06417 ; MUL_4434 .
GeneIDi 4550222.
KEGGi mul:MUL_4434.
PATRICi 18176673. VBIMycUlc37413_5139.

Organism-specific databases

GenoListi MUL_4434.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer."
    Stinear T.P., Seemann T., Pidot S., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J., Johnson P.D., Davies J.K., Jenkin G.A., Small P.L., Jones L.M.
    , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T.
    Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Agy99Imported.

Entry informationi

Entry nameiA0PVP8_MYCUA
AccessioniPrimary (citable) accession number: A0PVP8
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: September 3, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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