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A0PVP8

- A0PVP8_MYCUA

UniProt

A0PVP8 - A0PVP8_MYCUA

Protein
Submitted name:

ATP dependent DNA ligase

Gene

MUL_4434

Organism
Mycobacterium ulcerans (strain Agy99)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:MUL_4434Imported
    OrganismiMycobacterium ulcerans (strain Agy99)Imported
    Taxonomic identifieri362242 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000000765: Chromosome

    Organism-specific databases

    GenoListiMUL_4434.

    Interactioni

    Protein-protein interaction databases

    STRINGi362242.MUL_4434.

    Structurei

    3D structure databases

    ProteinModelPortaliA0PVP8.
    SMRiA0PVP8. Positions 16-302, 464-770.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSKGIHLY.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0PVP8-1 [UniParc]FASTAAdd to Basket

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    MGSAQAWPPG QANGPQVTLT NADKVLYPAT GTTKSDVFGY YTGIAEVMIP    50
    HIAGRPATRK RWPNGVDQAS FFEKQLASSA PDWLPRASVV HRSGTTTYPI 100
    IDSATGLAWI AQQAALEVHV PQWRFVAEWT SKGEILTPGP ATRLVFDLDP 150
    GEGVTMAQLA QVARAVRDLL ADIGLSTLPL TSGSKGLHFY TPLDEPVSSK 200
    GATVLAKRVA QQLETVMPAL VTATMTKSLR AGKVFLDWSQ NSGSKTTIAP 250
    YSLRGREQPT VAAPRSWEEL DDPGLRQLTY DEVLARLTRD GDLIAALDAD 300
    LPGDDRLLKY RSMRNASKTP EPVPRARPVV GQGNTFVIQE HHARRLHDDF 350
    RLERDGVLVS WAVPKNLPET TSVNHLAVHT EDHPLEYATF EGNIPKGEYG 400
    AGKVIIWDSG TYDTEKFRDD SRNGAEKGEV IVNLHGSRIS GRYALIQTNG 450
    DQWLAHRMKD QTAFDFDTLA PMLTSHGSVA GLESGQWAFE GKWDGYRLLV 500
    EADHGALRLR SRSGRDVTTE YPQLRSLAAD LADHHVVLDG ELVALDSSGV 550
    PSFNEMQNRV RATRIEFWAF DLLFLDGRSL LRARYRDRRK LLETLGSAGN 600
    LIVPELLPGD GAEALAYSHK RGWEGVIAKR RDSGYQPGRR SSAWIKDKHW 650
    NTQEVVIGGW RVGEGGRSSG IGSLLMGIPG PSGLHFAGRV GTGFTERDLA 700
    NLKKTLAPLH TDESPFDAAL PAREAKGVTF VVPTLVGEVR YSEWTPDDRL 750
    RQSSWRGLRP DKNPSEVVRE 770
    Length:770
    Mass (Da):84,666
    Last modified:January 9, 2007 - v1
    Checksum:i862DFB49A646BA06
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000325 Genomic DNA. Translation: ABL06417.1.
    RefSeqiWP_011742018.1. NC_008611.1.
    YP_907888.1. NC_008611.1.

    Genome annotation databases

    EnsemblBacteriaiABL06417; ABL06417; MUL_4434.
    GeneIDi4550222.
    KEGGimul:MUL_4434.
    PATRICi18176673. VBIMycUlc37413_5139.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000325 Genomic DNA. Translation: ABL06417.1 .
    RefSeqi WP_011742018.1. NC_008611.1.
    YP_907888.1. NC_008611.1.

    3D structure databases

    ProteinModelPortali A0PVP8.
    SMRi A0PVP8. Positions 16-302, 464-770.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 362242.MUL_4434.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL06417 ; ABL06417 ; MUL_4434 .
    GeneIDi 4550222.
    KEGGi mul:MUL_4434.
    PATRICi 18176673. VBIMycUlc37413_5139.

    Organism-specific databases

    GenoListi MUL_4434.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SKGIHLY.
    OrthoDBi EOG661H49.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer."
      Stinear T.P., Seemann T., Pidot S., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J., Johnson P.D.R., Davies J.K., Jenkin G.A., Small P.L.C., Jones L.M.
      , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T.
      Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Agy99Imported.

    Entry informationi

    Entry nameiA0PVP8_MYCUA
    AccessioniPrimary (citable) accession number: A0PVP8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3