A0PVH5 (A0PVH5_MYCUA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase LigC EMBL ABL06344.1

Gene names

Name:	ligC EMBL ABL06344.1
Ordered Locus Names:	MUL_4340 EMBL ABL06344.1

Organism

Mycobacterium ulcerans (strain Agy99) [Complete proteome] [HAMAP] EMBL ABL06344.1

Taxonomic identifier

362242 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium ulcerans

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABL06344.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0PVH5 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 46F12B555106E2EC	FASTA	358	40,376
	10 20 30 40 50 60 MDLPVMPPIS PMLAKAVKTI PADASYEPKW DGFRSICFRD NDEVELGSRN ERPLTRYFPE 70 80 90 100 110 120 LVAAVRAELP RRCVLDGEIV IATGHGLDFE ALQQRIHHAD SRVRMLAEHI PASFIAFDLL 130 140 150 160 170 180 ALGDDDYTTR PFVERRAALV EAVGSGPSIH VTPATTDQAT ARRWFEEFEG AGLDGVIAKP 190 200 210 220 230 240 LAVTYQPDKC VMFKLKHERT ADCVLAGYRL HKSGGDVIGS LLLGLYQDDG QLASVGVIGA 250 260 270 280 290 300 FPMAERRRLF TELQELVTSF DDHPWNWAAH QSGERTPRKN EFSRWNAGKD LSFVPLRPER 310 320 330 340 350 VVEVRYDHME GPRFRHTAQF NRWRPDRDPR SCTYAQLEQP LMFNLDDIVA GLGPRCGH

References

[1]

"Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer." Stinear T.P., Seemann T., Pidot S.J.A., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J.E., Johnson P.D.R., Davies J.K., Jenkin G.A., Small P.L.C., Jones L.M. , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T. Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Agy99 EMBL ABL06344.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000325 Genomic DNA. Translation: ABL06344.1.
RefSeq	YP_907815.1. NC_008611.1.
3D structure databases
ProteinModelPortal	A0PVH5.
ModBase	Search...
Protein-protein interaction databases
STRING	362242.MUL_4340.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL06344; ABL06344; MUL_4340.
GeneID	4550500.
KEGG	mul:MUL_4340.
PATRIC	18176443. VBIMycUlc37413_5026.
Organism-specific databases
GenoList	MUL_4340.
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	FKIKHER.
ProtClustDB	PRK08224.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0PVH5_MYCUA

Accession

Primary (citable) accession number: A0PVH5

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)