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A0PVH5

- A0PVH5_MYCUA

UniProt

A0PVH5 - A0PVH5_MYCUA

Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

ligC

Organism
Mycobacterium ulcerans (strain Agy99)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigCImported
    Gene namesi
    Name:ligCImported
    Ordered Locus Names:MUL_4340Imported
    OrganismiMycobacterium ulcerans (strain Agy99)Imported
    Taxonomic identifieri362242 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000000765: Chromosome

    Organism-specific databases

    GenoListiMUL_4340.

    Interactioni

    Protein-protein interaction databases

    STRINGi362242.MUL_4340.

    Structurei

    3D structure databases

    ProteinModelPortaliA0PVH5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0PVH5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDLPVMPPIS PMLAKAVKTI PADASYEPKW DGFRSICFRD NDEVELGSRN    50
    ERPLTRYFPE LVAAVRAELP RRCVLDGEIV IATGHGLDFE ALQQRIHHAD 100
    SRVRMLAEHI PASFIAFDLL ALGDDDYTTR PFVERRAALV EAVGSGPSIH 150
    VTPATTDQAT ARRWFEEFEG AGLDGVIAKP LAVTYQPDKC VMFKLKHERT 200
    ADCVLAGYRL HKSGGDVIGS LLLGLYQDDG QLASVGVIGA FPMAERRRLF 250
    TELQELVTSF DDHPWNWAAH QSGERTPRKN EFSRWNAGKD LSFVPLRPER 300
    VVEVRYDHME GPRFRHTAQF NRWRPDRDPR SCTYAQLEQP LMFNLDDIVA 350
    GLGPRCGH 358
    Length:358
    Mass (Da):40,376
    Last modified:January 9, 2007 - v1
    Checksum:i46F12B555106E2EC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000325 Genomic DNA. Translation: ABL06344.1.
    RefSeqiYP_907815.1. NC_008611.1.

    Genome annotation databases

    EnsemblBacteriaiABL06344; ABL06344; MUL_4340.
    GeneIDi4550500.
    KEGGimul:MUL_4340.
    PATRICi18176443. VBIMycUlc37413_5026.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000325 Genomic DNA. Translation: ABL06344.1 .
    RefSeqi YP_907815.1. NC_008611.1.

    3D structure databases

    ProteinModelPortali A0PVH5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 362242.MUL_4340.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL06344 ; ABL06344 ; MUL_4340 .
    GeneIDi 4550500.
    KEGGi mul:MUL_4340.
    PATRICi 18176443. VBIMycUlc37413_5026.

    Organism-specific databases

    GenoListi MUL_4340.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer."
      Stinear T.P., Seemann T., Pidot S., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J., Johnson P.D.R., Davies J.K., Jenkin G.A., Small P.L.C., Jones L.M.
      , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T.
      Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Agy99Imported.

    Entry informationi

    Entry nameiA0PVH5_MYCUA
    AccessioniPrimary (citable) accession number: A0PVH5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3