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A0PME1 (A0PME1_MYCUA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glutamate decarboxylase, GadB EMBL ABL03510.1
Gene names
Name:gadB EMBL ABL03510.1
Ordered Locus Names:MUL_0878 EMBL ABL03510.1
OrganismMycobacterium ulcerans (strain Agy99) [Complete proteome] [HAMAP] EMBL ABL03510.1
Taxonomic identifier362242 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium ›

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0PME1 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: A0334841DA0E1BA4

FASTA46151,052
        10         20         30         40         50         60 
MSRSHSSVPA HSIAPAYTGR LFTAPVPALR LPEESMDPEA AYRFIHDELM LDGSSRLNLA 

        70         80         90        100        110        120 
TFVTTWMDPE AGKLMAETFD KNMIDKDEYP ATAAIETRCV SMVADLFHAE GLRDDDPSSA 

       130        140        150        160        170        180 
TGVSTIGSSE AVMLGGLAMK WRWRQKVGKD WKGRTPNLVM GSNVQVVWEK FCRYFDVEPR 

       190        200        210        220        230        240 
YLPMEKGRYV ITPEQVVDAV DEDTFGVVAI LGTTYTGELE PVAEICAALD RLAAGGGVDV 

       250        260        270        280        290        300 
PVHVDAASGG FVVPFLHPDL KWDFRLPRVV SINVSGHKYG LTYPGVGFVV WRSPEYLPED 

       310        320        330        340        350        360 
LVFRVNYLGG DMPTFTLNFS RPGNQVVGQY YNFLRLGREG YINVMQALSE TARWLSAQLR 

       370        380        390        400        410        420 
EVDHCELIAD GSAIPVVAFR LAGDRGYTEF DLSHELRTFG WQVPAYTMPD NATDVSVLRI 

       430        440        450        460 
VVREGLSADM ARALHDDAVT SLRTLDKVKP GGNYDGQHFA H

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References

[1]"Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer."
Stinear T.P., Seemann T., Pidot S.J.A., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., Ma L., Tichit M., Porter J.L., Ryan J.E., Johnson P.D.R., Davies J.K., Jenkin G.A., Small P.L.C., Jones L.M. expand/collapse author list , Tekaia F., Laval F., Daffe M., Parkhill J., Cole S.T.
Genome Res. 17:192-200(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Agy99 EMBL ABL03510.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000325 Genomic DNA. Translation: ABL03510.1.
RefSeqYP_904981.1. NC_008611.1.

3D structure databases

ProteinModelPortalA0PME1.
ModBaseSearch...

Protein-protein interaction databases

STRING362242.MUL_0878.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL03510; ABL03510; MUL_0878.
GeneID4553783.
KEGGmul:MUL_0878.
PATRIC18168460. VBIMycUlc37413_1092.

Organism-specific databases

GenoListMUL_0878.
CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAIELREVP.
ProtClustDBCLSK792489.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0PME1_MYCUA
AccessionPrimary (citable) accession number: A0PME1
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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