A0PJX2 (CT118_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein C20orf118

Gene names

Name:

C20orf118

Organism

Homo sapiens (Human)

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	215 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the OXR1 family. Contains 1 TLD domain.

Ontologies

Keywords
Coding sequence diversity	Polymorphism
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 215	215	Uncharacterized protein C20orf118		PRO_0000318690
Regions
	Domain	79 – 215	137	TLD
	Compositional bias	26 – 32	7	Poly-Glu
Natural variations
	Natural variant	102	1	G → R. Corresponds to variant rs3748460 [ dbSNP | Ensembl ].		VAR_050439

Sequences

	Sequence		Length	Mass (Da)
	A0PJX2 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 6245E8FAC2C16D15	FASTA	215	23,912
	10 20 30 40 50 60 MRGLRWRYTR LPSQVEDTLS GEEGNEEEEE EEAAPDPAAA PEDPTVPQLT EASQVLSASE 70 80 90 100 110 120 IRQLSFHFPP RVTGHPWSLV FCTSRDGFSL QSLYRRMEGC SGPVLLVLRD QDGQIFGAFS 130 140 150 160 170 180 SSAIRLSKGF YGTGETFLFS FSPQLKVFKW TGSNSFFVKG DLDSLMMGSG SGRFGLWLDG 190 200 210 DLFRGGSSPC PTFNNEVLAR QEQFCIQELE AWLLS

References

[1]

"Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S. Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Colon.

[2]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK123544 mRNA. Translation: BAG53910.1. BC127688 mRNA. Translation: AAI27689.1. BC130646 mRNA. Translation: AAI30647.1. BC130648 mRNA. Translation: AAI30649.1.
IPI	IPI00552055.
RefSeq	NP_542195.1. NM_080628.1.
UniGene	Hs.472630.
3D structure databases
ProteinModelPortal	A0PJX2.
ModBase	Search...
Proteomic databases
PRIDE	A0PJX2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000217320; ENSP00000217320; ENSG00000101342.
GeneID	140711.
KEGG	hsa:140711.
UCSC	uc002xgg.1. human.
Organism-specific databases
CTD	140711.
GeneCards	GC20P035504.
HGNC	HGNC:16112. C20orf118.
neXtProt	NX_A0PJX2.
PharmGKB	PA25658.
GenAtlas	Search...
Phylogenomic databases
eggNOG	prNOG10214.
GeneTree	ENSGT00410000025363.
HOGENOM	HBG748961.
HOVERGEN	HBG057616.
InParanoid	A0PJX2.
OMA	HLLPRSM.
OrthoDB	EOG4N04FZ.
PhylomeDB	A0PJX2.
Gene expression databases
Bgee	A0PJX2.
CleanEx	HS_C20orf118.
Genevestigator	A0PJX2.
Family and domain databases
InterPro	IPR006571. TLDc. [Graphical view]
Pfam	PF07534. TLD. 1 hit. [Graphical view]
SMART	SM00584. TLDc. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	84287.

Entry information

Entry name

CT118_HUMAN

Accession

Primary (citable) accession number: A0PJX2
Secondary accession number(s): B3KVU8

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 26, 2008
Last sequence update:	January 9, 2007
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.