Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Sialidase 3.1

Gene

neu3.1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • exo-alpha-sialidase activity Source: ZFIN

GO - Biological processi

  • ganglioside metabolic process Source: ZFIN
Complete GO annotation...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase 3.1Imported
Gene namesi
Name:neu3.1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-061201-39. neu3.1.

Subcellular locationi

GO - Cellular componenti

  • endoplasmic reticulum Source: ZFIN
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiA0PJS4.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000109121.

Structurei

3D structure databases

ProteinModelPortaliA0PJS4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 364324SialidasesInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IFVF. Eukaryota.
ENOG410Y74Z. LUCA.
HOVERGENiHBG052608.
KOiK12357.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

A0PJS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKSYPEAQ RPPPAQTVLF QQKDGKTYRI PALIYISDGQ TFLAFAEERS
60 70 80 90 100
TPRDSDAKVL VMRKGSLHNG SLQWTSAQTL TSACLPDHRT MNPCPVYERK
110 120 130 140 150
SKTIYLFFIC ISGNTTEYHQ IAMGRNRARL CYITSADYGE TWSELTDLTN
160 170 180 190 200
SVIGDEIHNW ATFAVGPGHG IQMKSGRLII PAYVYYVHCR CFPFNFPLIV
210 220 230 240 250
RPHALSFYSD DCGVTWQMGG KIQMKSCECE MAEIIDHADQ SHLYCNARST
260 270 280 290 300
CGYRIEALSE TSGAAFDNPH VARKLVEPRH GCQGSVLSFP VPQPLDEEEK
310 320 330 340 350
KPTDCLTQSD SKTWLLYSHP TNKKKRKDLG VYLNKSPLNA SGWSRPWIIY
360 370 380 390
KGPSGYSDLT QCEERFGCLM ECGEKSEIEG IAFVEFKLND LLCS
Length:394
Mass (Da):44,370
Last modified:January 9, 2007 - v1
Checksum:iA612627014501DBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC127592 mRNA. Translation: AAI27593.1.
RefSeqiNP_001073133.1. NM_001079665.1.
UniGeneiDr.90312.

Genome annotation databases

GeneIDi780844.
KEGGidre:780844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC127592 mRNA. Translation: AAI27593.1.
RefSeqiNP_001073133.1. NM_001079665.1.
UniGeneiDr.90312.

3D structure databases

ProteinModelPortaliA0PJS4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000109121.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Proteomic databases

PaxDbiA0PJS4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi780844.
KEGGidre:780844.

Organism-specific databases

CTDi780844.
ZFINiZDB-GENE-061201-39. neu3.1.

Phylogenomic databases

eggNOGiENOG410IFVF. Eukaryota.
ENOG410Y74Z. LUCA.
HOVERGENiHBG052608.
KOiK12357.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: KidneyImported.

Entry informationi

Entry nameiA0PJS4_DANRE
AccessioniPrimary (citable) accession number: A0PJS4
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: June 8, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.