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A0PJN2 (A0PJN2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cln6 MGI 2159324 EMBL AAI16795.1
OrganismMus musculus (Mouse) EMBL AAI16795.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length281 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAI16795.1

Sequences

Sequence LengthMass (Da)Tools
A0PJN2 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: C652580BFD53BC92

FASTA28133,099
        10         20         30         40         50         60 
SVKAEDKDRT APFHLDLWFY FTLQNWVLDF GRPIAMLVFP IQWFPLNKPS VGDYFHMTYN 

        70         80         90        100        110        120 
IITPFLLLKL IERSPRTLPR SIVYVSIITF IMGASIHLVG DSVNHRLLFS GYQHHLSVRE 

       130        140        150        160        170        180 
NPIIKNLKPE TLIDSFELLY YYDEYLGHCM WYIPFFLILF MYFSGCFTTC KAESHMPGPA 

       190        200        210        220        230        240 
LLLVVPSGLY YWYLVTEGQI FILFIFTFFA MLALVLHQKR RRLFLDSNGL FLLYSFALTL 

       250        260        270        280 
SLVALWVAWL WNDPVLRKKY PGVIYVPEPW AFYTLHVSSQ Q 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAI16795.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC116794 mRNA. Translation: AAI16795.1.
BC116798 mRNA. Translation: AAI16799.1.
UniGeneMm.283636.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000034776.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc012gut.1. mouse.

Organism-specific databases

MGIMGI:2159324. Cln6.

Phylogenomic databases

eggNOGNOG27962.
HOVERGENHBG039396.
InParanoidA0PJN2.

Gene expression databases

GenevestigatorA0PJN2.

Family and domain databases

InterProIPR029255. CLN6.
[Graphical view]
PfamPF15156. CLN6. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCLN6. mouse.
NextBio35542300.
SOURCESearch...

Entry information

Entry nameA0PJN2_MOUSE
AccessionPrimary (citable) accession number: A0PJN2
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)