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Protein
Submitted name:

Rbm15 protein

Gene

Rbm15

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • negative regulation of myeloid cell differentiation Source: MGI
  • negative regulation of transcription from RNA polymerase II promoter Source: MGI
  • patterning of blood vessels Source: MGI
  • placenta blood vessel development Source: MGI
  • positive regulation of transcription of Notch receptor target Source: MGI
  • spleen development Source: MGI
  • ventricular septum morphogenesis Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rbm15 proteinImported
Gene namesi
Name:Rbm15Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2443205. Rbm15.

Subcellular locationi

GO - Cellular componenti

  • nucleoplasm Source: MGI
  • nucleus Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiA0PJG5.

Expressioni

Gene expression databases

BgeeiA0PJG5.
ExpressionAtlasiA0PJG5. baseline and differential.
GenevestigatoriA0PJG5.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG250829.
HOVERGENiHBG082873.

Family and domain databases

Gene3Di2.40.290.10. 1 hit.
InterProiIPR012921. SPOC_C.
IPR016194. SPOC_like_C_dom.
IPR010912. SPOC_met.
[Graphical view]
PfamiPF07744. SPOC. 1 hit.
[Graphical view]
SUPFAMiSSF100939. SSF100939. 1 hit.
PROSITEiPS50917. SPOC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A0PJG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KEDRSDGNAP SASTSSSKQK PPSQKQDGGT APVAASSPKL CLAWQGMLLL
60 70 80 90 100
KNSNFPSNMH LLQGDLQVAS SLLVEGSTGG KVAQLKITQR LRLDQPKLDE
110 120 130 140 150
VTRRIKVAGP NGYAILLAVP GSSDSRSSSS SATSDTAAST QRPLRNLVSY
160 170 180 190 200
LKQKQAAGVI SLPVGGNKDK ENTGVLHAFP PCEFSQQFLD SPAKALAKSE
210
EDYLVMIIVR AKLVNSG
Length:217
Mass (Da):22,915
Last modified:January 9, 2007 - v1
Checksum:i4AFC0693548BDDB1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC028452 mRNA. Translation: AAH28452.1.
UniGeneiMm.27966.
Mm.472803.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC028452 mRNA. Translation: AAH28452.1.
UniGeneiMm.27966.
Mm.472803.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiA0PJG5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:2443205. Rbm15.

Phylogenomic databases

eggNOGiNOG250829.
HOVERGENiHBG082873.

Miscellaneous databases

ChiTaRSiRbm15. mouse.
NextBioi35542288.
SOURCEiSearch...

Gene expression databases

BgeeiA0PJG5.
ExpressionAtlasiA0PJG5. baseline and differential.
GenevestigatoriA0PJG5.

Family and domain databases

Gene3Di2.40.290.10. 1 hit.
InterProiIPR012921. SPOC_C.
IPR016194. SPOC_like_C_dom.
IPR010912. SPOC_met.
[Graphical view]
PfamiPF07744. SPOC. 1 hit.
[Graphical view]
SUPFAMiSSF100939. SSF100939. 1 hit.
PROSITEiPS50917. SPOC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6JImported.
    Tissue: Thymus glandImported.

Entry informationi

Entry nameiA0PJG5_MOUSE
AccessioniPrimary (citable) accession number: A0PJG5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: March 4, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.