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A0M6U5 (A0M6U5_GRAFK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.13.11.6 EMBL CAL68340.1
Gene names
Ordered Locus Names:GFO_3400
OrganismGramella forsetii (strain KT0803) [Complete proteome] [HAMAP]
Taxonomic identifier411154 [NCBI]
Taxonomic lineageBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeGramella

Protein attributes

Sequence length180 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A0M6U5 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: E1B1A608CB0B25F2

FASTA18020,978
        10         20         30         40         50         60 
MSVEGPFNLN KWIEQNRESL KPPVGNRNLY KESGDYIVMI VAGPNARKDY HYNETEELFY 

        70         80         90        100        110        120 
QLEGNIEINI QEDGKKKTMK LGPGDMYLHP AKVPHSPIRH EGSIGLVVER KRFNEDGKDG 

       130        140        150        160        170        180 
LIWYCDNCNN KLHEVYFPLQ DIETDFLKHF RNFYSSKELR TCDNCGEVMP ADERFTAVEE 

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References

[1]"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter."
Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O.
Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU207366 Genomic DNA. Translation: CAL68340.1.
RefSeqYP_863407.1. NC_008571.1.

3D structure databases

ProteinModelPortalA0M6U5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0M6U5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4651439.
GenomeReviewsGene locus GFO_3400 in contig CU207366_GR.
KEGGgfo:GFO_3400.
NMPDRfig|411154.5.peg.3208.
PATRIC22075532. VBIGraFor5527_3278.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG77058.
HOGENOMHBG341987.
OMALKPPVNN.
PhylomeDBA0M6U5.
ProtClustDBPRK13264.

Family and domain databases

InterProIPR010329. 3hydroanth_dOase.
IPR011051. Cupin_RmlC_type.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
Gene3DG3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
KOK00452.
PANTHERPTHR15497. PTHR15497. 1 hit.
PfamPF06052. 3-HAO. 1 hit.
[Graphical view]
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
TIGRFAMsTIGR03037. Anthran_nbaC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0M6U5_GRAFK
AccessionPrimary (citable) accession number: A0M6U5
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)