A0M6P9 (A0M6P9_GRAFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL CAL68294.1
EC=5.1.1.1 EMBL CAL68294.1

Gene names

Name:	alr EMBL CAL68294.1
Ordered Locus Names:	GFO_3353

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella › Gramella forsetii

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL CAL68294.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0M6P9 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 487B9400E2E95535	FASTA	369	41,435
	10 20 30 40 50 60 MPEAKETVLE INLGNLAHNY RFLRSKTDKE AKFLSVVKAH AYGSDSVEIA KKLEELGTDY 70 80 90 100 110 120 FAVAYVEEGI RLRENGISKP ILVLHPQPSH FEEIIEHCLE PNLYSQKTLE SFVSLAERLN 130 140 150 160 170 180 QKNYPVHIKL NTGLNRLGFD QSEIPRVFET IKNTNSIKIA SVFSHLAASE DWQEREFTLS 190 200 210 220 230 240 QIDLFRKMTW QLIENLDYEP LLHICNTSGV INYPKAAFSM VRTGIGLYGY SNDKTIDPHL 250 260 270 280 290 300 KPVGKLKTII SQIRKLDPGA SVGYNRAFKT EKESKIATLP IGHADGINRI YGKQKAGVFV 310 320 330 340 350 360 NGKYAPIVGN VCMDIIMIDV TGIDCEEGDE VIIFGGPQHP VDFARAGGTI SYELITGIQR RVTRKIIPE

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT0803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL68294.1.
RefSeq	YP_863361.1. NC_008571.1.
3D structure databases
ProteinModelPortal	A0M6P9.
ModBase	Search...
Protein-protein interaction databases
STRING	411154.GFO_3353.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAL68294; CAL68294; GFO_3353.
GeneID	4652677.
KEGG	gfo:GFO_3353.
PATRIC	22075438. VBIGraFor5527_3232.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	SIQDYEY.
ProtClustDB	CLSK2399160.
Enzyme and pathway databases
BioCyc	GFOR411154:GI79-3356-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0M6P9_GRAFK

Accession

Primary (citable) accession number: A0M6P9

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)