A0M5Y2 (A0M5Y2_GRAFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL CAL68027.1
EC=1.2.4.2 EMBL CAL68027.1

Gene names

Name:	sucA EMBL CAL68027.1
Ordered Locus Names:	GFO_3083

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella

Protein attributes

Sequence length	926 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL CAL68027.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0M5Y2 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 83BF1DE2BF4B730E	FASTA	926	106,197
	10 20 30 40 50 60 MDRFSFLNAA HTAYFAELYD QYLKHPDSVE PSWRAFFQGF DFGMQENGIS EEVLGEAPVD 70 80 90 100 110 120 FAEGDIPAHV IKEFQVIRLI DGYRTRGHLF TKTNPVRERR KYEPTLEISN FGLEESDLQT 130 140 150 160 170 180 TFNAGDILGI GPTTLKEIVR HLENIYCESI GIEYMYIRKP EELQWIQDKL NVNENHPEFD 190 200 210 220 230 240 DAQKKQILKK LNEAVSFESF LHTKYVGQKR FSLEGGESLI PGLDAIIEKA AEFGVEEFVM 250 260 270 280 290 300 GMAHRGRLNT LTNIFGKSAK DIFSEFDGKD YEQDIFDGDV KYHLGWTSCR KTDSGKGINI 310 320 330 340 350 360 NIAPNPSHLE TVGAVVEGIT RAKQDRRYKG DNSKVLPILV HGDAAIAGQG IAYEIVQMAQ 370 380 390 400 410 420 LEGYETGGTI HIVVNNQIGF TTNYLDARSS TYCTDVGKVT LSPVLHVNSD DAEAVVHAML 430 440 450 460 470 480 FALDFRMKFK RDVFIDLLGY RKYGHNEGDE PRFTQPKLYK AISKHENARD IYFEKLKKQG 490 500 510 520 530 540 VADDEYLKEL EDTYKAALEE NLEDSRKEET TRITPFMAEE WEGFESAQED EMMKDVDTTF 550 560 570 580 590 600 DLDRLDKVAE AVSQLPEGKK FMRKIKKIID GRKKMYFEDN KLDWSMAEHL AYGSLMAEGY 610 620 630 640 650 660 NIRISGQDSE RGTFSHRHAV VKVEDSEEEI ILHNNIEERD GDFFIYNSPL SEYGVVGFDY 670 680 690 700 710 720 GYSMASPTTL NIWEAQFGDF VNGAQIVIDQ YISAAEDKWK LQNGLVMLLP HGYEGQGAEH 730 740 750 760 770 780 SSGRMERFLQ LCAKDNMYVA DVSTPANMFH ILRRQMKAKF RKPLIIFTPK SLLRHSKVIS 790 800 810 820 830 840 TKEEFATGSF QPVIDDHDAN IEKIKTLVFC TGKFYYDLLK HREENEREDV ALVRIEQLFP 850 860 870 880 890 900 LPISKMKELM DTYKNADDVV WAQEEPRNMG AYSHLLLHFE EARKFRVCSR KFYGSPAAGS 910 920 SVRFKKRHER VINSVFDKNL NEEENN

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL68027.1.
RefSeq	YP_863094.1. NC_008571.1.
3D structure databases
ProteinModelPortal	A0M5Y2.
ModBase	Search...
Protein-protein interaction databases
STRING	A0M5Y2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4652970.
GenomeReviews	Gene locus GFO_3083 in contig CU207366_GR.
KEGG	gfo:GFO_3083.
NMPDR	fig|411154.5.peg.2902.
PATRIC	22074904. VBIGraFor5527_2968.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HBG289950.
OMA	EGDEPAF.
PhylomeDB	A0M5Y2.
ProtClustDB	PRK09404.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0M5Y2_GRAFK

Accession

Primary (citable) accession number: A0M5Y2

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)