A0M4V8 (A0M4V8_GRAFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Phosphatidylserine decarboxylase proenzyme HAMAP MF_00664
EC=4.1.1.65 HAMAP MF_00664

Gene names

Name:	psd HAMAP MF_00664 EMBL CAL67653.1
Ordered Locus Names:	GFO_2697

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella

Protein attributes

Sequence length	218 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00664 SAAS SAAS003817
Cofactor	Pyruvoyl group By similarity. HAMAP MF_00664 SAAS SAAS003817
Pathway	Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00664 SAAS SAAS003817
Sequence similarities	Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily. HAMAP MF_00664

Ontologies

Keywords
Biological process	Phospholipid biosynthesis HAMAP MF_00664 SAAS SAAS003817
Ligand	Pyruvate HAMAP MF_00664 SAAS SAAS003817
Molecular function	Decarboxylase HAMAP MF_00664 SAAS SAAS003817 Lyase
PTM	Zymogen HAMAP MF_00664
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	phosphatidylethanolamine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	cofactor binding Inferred from electronic annotation. Source: InterPro phosphatidylserine decarboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Site	185 – 186	2	Cleavage (non-hydrolytic) By similarity HAMAP MF_00664
Amino acid modifications
	Modified residue	186	1	Pyruvic acid (Ser) By similarity HAMAP MF_00664

Sequences

	Sequence		Length	Mass (Da)
	A0M4V8 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 58D463D04C8EBFD2	FASTA	218	24,651
	10 20 30 40 50 60 MFHKEGYKIM TITAIILIAI NIISYSLINV YWIKFAVLLT SILFFFLIIQ FFRNPKRTTS 70 80 90 100 110 120 LNNEHIIAPV DGKVVVIEEV YEKEYFKDKR LQISIFMSPI NVHVTRHPVG GKVTFSKYHP 130 140 150 160 170 180 GKFLVAWHPK SSEENERTTV VVKNEAIGEI LYRQIAGAMA KRIVNYAEVD TEVVQGSDSG 190 200 210 FIKFGSRVDV FVPIGTKVNV EINQKVKGGI SIIADVAS

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL67653.1.
RefSeq	YP_862720.1. NC_008571.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A0M4V8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4652333.
GenomeReviews	Gene locus GFO_2697 in contig CU207366_GR.
KEGG	gfo:GFO_2697.
NMPDR	fig|411154.5.peg.2548.
PATRIC	22074148. VBIGraFor5527_2602.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0688.
HOGENOM	HBG541103.
OMA	IFMSVFN.
ProtClustDB	PRK05305.
Family and domain databases
HAMAP	MF_00664. PS_decarb_type3. [Tree]
InterPro	IPR003817. PS_Dcarbxylase. IPR004428. PtdSer_deCO2ase-related. [Graphical view]
KO	K01613.
Pfam	PF02666. PS_Dcarbxylase. 1 hit. [Graphical view]
TIGRFAMs	TIGR00164. PS_decarb_rel. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0M4V8_GRAFK

Accession

Primary (citable) accession number: A0M4V8

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)