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A0M3E3

- A0M3E3_GRAFK

UniProt

A0M3E3 - A0M3E3_GRAFK

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Gramella forsetii (strain KT0803)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (12 Dec 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGFOR411154:GI79-2173-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
    Gene namesi
    Name:gabTImported
    Ordered Locus Names:GFO_2173Imported
    OrganismiGramella forsetii (strain KT0803)Imported
    Taxonomic identifieri411154 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeGramella
    ProteomesiUP000000755: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi411154.GFO_2173.

    Structurei

    3D structure databases

    ProteinModelPortaliA0M3E3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiKMTMFAN.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0M3E3-1 [UniParc]FASTAAdd to Basket

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    MIEKNTQAQE LLERRKNIVA NGVGIFNTAT VKEAKGAIIT DVDGRELIDF    50
    AGGIGVVNAG HCPEPVVEAI REQAGKYLHT SFNVVTYEPY IKLCEELAEI 100
    LPHGEKTKAM LISTGAEAVE NAIKIARQAT KRPAILCYTE AYHGRTLMAM 150
    SLTSKVNYKF SSGPFAPEVY RIPFPNFYKY GGTQEMDDFV DTELNRLRES 200
    AHSMVDINSV AAIIIEPIQG EGGFNPVPQR YLEGLRSFCD EHGVLLILDE 250
    IQSGFCRTGH WASWQHYNVE PDISTYAKSL GSGLPIAAVL GKAEIMDAAG 300
    SGTIGGTYIG SPVCCAAALA TIQYMKDINL NERAVQVGKI VTDRIKKLQK 350
    EYPGIGDVRG IGAMIGIEFV KENNPGKPDT ELCDKIVKGC AEEGLILLSA 400
    GTFKNVIRIL SPLVITDEQL NKGLDILVNQ IKKNI 435
    Length:435
    Mass (Da):47,422
    Last modified:December 12, 2006 - v1
    Checksum:i3C7576AEF74555F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU207366 Genomic DNA. Translation: CAL67138.1.
    RefSeqiWP_011710041.1. NC_008571.1.
    YP_862205.1. NC_008571.1.

    Genome annotation databases

    EnsemblBacteriaiCAL67138; CAL67138; GFO_2173.
    GeneIDi4650448.
    KEGGigfo:GFO_2173.
    PATRICi22073117. VBIGraFor5527_2096.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU207366 Genomic DNA. Translation: CAL67138.1 .
    RefSeqi WP_011710041.1. NC_008571.1.
    YP_862205.1. NC_008571.1.

    3D structure databases

    ProteinModelPortali A0M3E3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 411154.GFO_2173.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAL67138 ; CAL67138 ; GFO_2173 .
    GeneIDi 4650448.
    KEGGi gfo:GFO_2173.
    PATRICi 22073117. VBIGraFor5527_2096.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi KMTMFAN.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci GFOR411154:GI79-2173-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter."
      Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O.
      Environ. Microbiol. 8:2201-2213(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KT0803Imported.

    Entry informationi

    Entry nameiA0M3E3_GRAFK
    AccessioniPrimary (citable) accession number: A0M3E3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 12, 2006
    Last sequence update: December 12, 2006
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3