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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Gramella forsetii (strain KT0803)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciGFOR411154:GI79-2173-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:GFO_2173Imported
OrganismiGramella forsetii (strain KT0803)Imported
Taxonomic identifieri411154 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeGramella
ProteomesiUP000000755 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi411154.GFO_2173.

Structurei

3D structure databases

ProteinModelPortaliA0M3E3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiICWRAFE.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0M3E3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEKNTQAQE LLERRKNIVA NGVGIFNTAT VKEAKGAIIT DVDGRELIDF
60 70 80 90 100
AGGIGVVNAG HCPEPVVEAI REQAGKYLHT SFNVVTYEPY IKLCEELAEI
110 120 130 140 150
LPHGEKTKAM LISTGAEAVE NAIKIARQAT KRPAILCYTE AYHGRTLMAM
160 170 180 190 200
SLTSKVNYKF SSGPFAPEVY RIPFPNFYKY GGTQEMDDFV DTELNRLRES
210 220 230 240 250
AHSMVDINSV AAIIIEPIQG EGGFNPVPQR YLEGLRSFCD EHGVLLILDE
260 270 280 290 300
IQSGFCRTGH WASWQHYNVE PDISTYAKSL GSGLPIAAVL GKAEIMDAAG
310 320 330 340 350
SGTIGGTYIG SPVCCAAALA TIQYMKDINL NERAVQVGKI VTDRIKKLQK
360 370 380 390 400
EYPGIGDVRG IGAMIGIEFV KENNPGKPDT ELCDKIVKGC AEEGLILLSA
410 420 430
GTFKNVIRIL SPLVITDEQL NKGLDILVNQ IKKNI
Length:435
Mass (Da):47,422
Last modified:December 12, 2006 - v1
Checksum:i3C7576AEF74555F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU207366 Genomic DNA. Translation: CAL67138.1.
RefSeqiWP_011710041.1. NC_008571.1.

Genome annotation databases

EnsemblBacteriaiCAL67138; CAL67138; GFO_2173.
KEGGigfo:GFO_2173.
PATRICi22073117. VBIGraFor5527_2096.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU207366 Genomic DNA. Translation: CAL67138.1.
RefSeqiWP_011710041.1. NC_008571.1.

3D structure databases

ProteinModelPortaliA0M3E3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi411154.GFO_2173.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL67138; CAL67138; GFO_2173.
KEGGigfo:GFO_2173.
PATRICi22073117. VBIGraFor5527_2096.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiICWRAFE.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciGFOR411154:GI79-2173-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter."
    Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O.
    Environ. Microbiol. 8:2201-2213(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT0803Imported.

Entry informationi

Entry nameiA0M3E3_GRAFK
AccessioniPrimary (citable) accession number: A0M3E3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: July 22, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.