A0M3E3 (A0M3E3_GRAFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL CAL67138.1
EC=2.6.1.19 EMBL CAL67138.1

Gene names

Name:	gabT EMBL CAL67138.1
Ordered Locus Names:	GFO_2173

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella › Gramella forsetii

Protein attributes

Sequence length	435 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAL67138.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0M3E3 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 3C7576AEF74555F3	FASTA	435	47,422
	10 20 30 40 50 60 MIEKNTQAQE LLERRKNIVA NGVGIFNTAT VKEAKGAIIT DVDGRELIDF AGGIGVVNAG 70 80 90 100 110 120 HCPEPVVEAI REQAGKYLHT SFNVVTYEPY IKLCEELAEI LPHGEKTKAM LISTGAEAVE 130 140 150 160 170 180 NAIKIARQAT KRPAILCYTE AYHGRTLMAM SLTSKVNYKF SSGPFAPEVY RIPFPNFYKY 190 200 210 220 230 240 GGTQEMDDFV DTELNRLRES AHSMVDINSV AAIIIEPIQG EGGFNPVPQR YLEGLRSFCD 250 260 270 280 290 300 EHGVLLILDE IQSGFCRTGH WASWQHYNVE PDISTYAKSL GSGLPIAAVL GKAEIMDAAG 310 320 330 340 350 360 SGTIGGTYIG SPVCCAAALA TIQYMKDINL NERAVQVGKI VTDRIKKLQK EYPGIGDVRG 370 380 390 400 410 420 IGAMIGIEFV KENNPGKPDT ELCDKIVKGC AEEGLILLSA GTFKNVIRIL SPLVITDEQL 430 NKGLDILVNQ IKKNI

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT0803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL67138.1.
RefSeq	YP_862205.1. NC_008571.1.
3D structure databases
ProteinModelPortal	A0M3E3.
ModBase	Search...
Protein-protein interaction databases
STRING	411154.GFO_2173.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAL67138; CAL67138; GFO_2173.
GeneID	4650448.
KEGG	gfo:GFO_2173.
PATRIC	22073117. VBIGraFor5527_2096.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K07250.
Enzyme and pathway databases
BioCyc	GFOR411154:GI79-2200-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0M3E3_GRAFK

Accession

Primary (citable) accession number: A0M3E3

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)