A0M3B1 (A0M3B1_GRAFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL CAL67106.1
EC=3.2.1.1 EMBL CAL67106.1

Gene names

Ordered Locus Names:

GFO_2141

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAL67106.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-amylase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0M3B1 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 636B2B3B8EFCBEC8	FASTA	484	55,385
	10 20 30 40 50 60 MKKIKYFNVF MLAVTLIFSS CSTDDDNNDP LDPTDDGIGT EQPTPAEPEA IDLAAFDNDQ 70 80 90 100 110 120 RVMMQAFYWD VEPRFEWWDL LSEKVPGWAD AGVDRIWLPV ASKGQSGPFS MGYDPSDYYD 130 140 150 160 170 180 FGNYEQQGTV ETRFGSREEL ENLIATAHDN DLEVIADIVI NHNSGGGLQY NPYRDYETYT 190 200 210 220 230 240 LFNEENGNAS GMFNRTYEDF YPNSVSEYDP GSLFYPETNL DHHLDRVQNW LWKDENSVAK 250 260 270 280 290 300 YYKNVMGFDG WRFDYVKGFE PWVVKEWLAE VGGFSVGENF DGNPDVLRDW IEASGSAAFD 310 320 330 340 350 360 FSTFYKLEES LDRFKDLTNL EKDMLWKTDP ENAVTFTANH DTEKDDNVDN YIASQNKLKA 370 380 390 400 410 420 YAYILTHPGY PTIFYSDYEN ADFQDEIKQM IAIHNSIATG ETEILYVDND EYVMKRSGTG 430 440 450 460 470 480 TNPGLILYIS ISNNTKRRTV SSNWNNITLM DYSGNSSYNP TSDENGMVQI EAPSNGYAIY SITK

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL67106.1.
RefSeq	YP_862173.1. NC_008571.1.
3D structure databases
ProteinModelPortal	A0M3B1.
ModBase	Search...
Protein-protein interaction databases
STRING	A0M3B1.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4650422.
GenomeReviews	Gene locus GFO_2141 in contig CU207366_GR.
KEGG	gfo:GFO_2141.
NMPDR	fig|411154.5.peg.2029.
PATRIC	22073055. VBIGraFor5527_2065.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG478148.
OMA	YRDYEEW.
PhylomeDB	A0M3B1.
ProtClustDB	PRK09441.
Family and domain databases
InterPro	IPR015237. Alpha-amylase_C_pro. IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01176.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF09154. DUF1939. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0M3B1_GRAFK

Accession

Primary (citable) accession number: A0M3B1

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)