A0M1X3 (GCP_GRAFK) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	GFO_1645

Organism

Gramella forsetii (strain KT0803) [Complete proteome] [HAMAP]

Taxonomic identifier

411154 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella

Protein attributes

Sequence length	340 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 340	340	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_0000303378

Sequences

	Sequence		Length	Mass (Da)
	A0M1X3 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: AB2AF38621E03E7A	FASTA	340	37,232
	10 20 30 40 50 60 MSDQKINILA IESSCDDTAA AVLCNGKILS NIVATQKVHE QYGGVVPELA SRAHQQNIVP 70 80 90 100 110 120 VIHQALAKAN IDKKDVSAIA FTRGPGLMGS LLVGTSFAKS LSMGLNIPLI EINHMQAHIL 130 140 150 160 170 180 AHFIEEDDFE KPTFPFLAMT ISGGHTQIVK VTDYFKMEVI GETIDDAVGE AFDKSAKILG 190 200 210 220 230 240 LPYPGGPLID KYAQEGDPKA FKFPKPKVDG LNFSFSGFKT AVLYFVQRET KNDPEFVEKN 250 260 270 280 290 300 LKDICASIQY TIIGILIDKL KKAVKETGIT QVAIAGGVSA NSGIRQALKD AEQKWGWKCF 310 320 330 340 VPKFEYTTDN AAMIGIAGYH KYLKKDFADF SVTAQSRYKF

References

[1]

"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter." Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O. Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT0803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU207366 Genomic DNA. Translation: CAL66618.1.
RefSeq	YP_861685.1. NC_008571.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A0M1X3.
Protein family/group databases
MEROPS	M22.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4650009.
GenomeReviews	Gene locus GFO_1645 in contig CU207366_GR.
KEGG	gfo:GFO_1645.
NMPDR	fig|411154.5.peg.1558.
PATRIC	22072083. VBIGraFor5527_1587.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0533.
HOGENOM	HBG304663.
OMA	PAVGVHH.
PhylomeDB	A0M1X3.
ProtClustDB	PRK09604.
Enzyme and pathway databases
BioCyc	GFOR411154:GFO_1645-MONOMER.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_GRAFK

Accession

Primary (citable) accession number: A0M1X3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program