Skip Header

Contribute Send feedback
Read comments (?) or add your own

A0LXJ0 (A0LXJ0_GRAFK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnS HAMAP MF_00534 EMBL CAL65085.1
Ordered Locus Names:GFO_0096
OrganismGramella forsetii (strain KT0803) [Complete proteome] [HAMAP]
Taxonomic identifier411154 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Gramella

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
A0LXJ0 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: C374CBCE63E316AF

FASTA48055,318
        10         20         30         40         50         60 
MIQAKIAEIL ESDQFLQEHH VKGWVRSFRS NRFIAINDGS TIKNLQCVID FENTDEDLIK 

        70         80         90        100        110        120 
RINVGAAISV KGTLKESQGS QQRVEVDVTE LKILGDANPE EVKLTILSPK KHSLEKLREQ 

       130        140        150        160        170        180 
AHLRVRTNTF GAVMRVRSKL SFAVHKYFQE KNFYYVNTPI ITGSDAEGAG EMFRVSALDM 

       190        200        210        220        230        240 
KNPPKNEDGS INYKEDFFGK ETNLTVSGQL EAETFALGLG QVYTFGPTFR AENSNTSRHL 

       250        260        270        280        290        300 
AEFWMIEPEV AFCDLDQNMD LAEDFIKYVL RYVIENCKED LEFLAERQES EDKLKPKAER 

       310        320        330        340        350        360 
SEMTLLEKLN FVLDNNFKRV SYTEAIEILK NSKPNKKKKF NYVIEEWGAD LQSEHERFLV 

       370        380        390        400        410        420 
EKHFKCPVIL FDYPANIKAF YMRMNEDGKT VRAMDILFPG IGEIVGGSQR EERLDVLKEK 

       430        440        450        460        470        480 
MAELDIPEEE LWWYLDTRKF GTCVHSGFGL GFERLVQFTT GMGNIRDVIP FPRTPQNAEF

« Hide

References

[1]"Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter."
Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O.
Environ. Microbiol. 8:2201-2213(2006) [PubMed: 17107561] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU207366 Genomic DNA. Translation: CAL65085.1.
RefSeqYP_860168.1. NC_008571.1.

3D structure databases

ProteinModelPortalA0LXJ0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0LXJ0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4652870.
GenomeReviewsGene locus GFO_0096 in contig CU207366_GR.
KEGGgfo:GFO_0096.
NMPDRfig|411154.5.peg.95.
PATRIC22069069. VBIGraFor5527_0096.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHBG745843.
OMAAIHRFFH.
PhylomeDBA0LXJ0.
ProtClustDBPRK03932.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0LXJ0_GRAFK
AccessionPrimary (citable) accession number: A0LXJ0
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info