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Protein
Submitted name:

Complete circular genome

Gene

GFO_0018

Organism
Gramella forsetii (strain KT0803)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorus-oxygen lyase activity Source: InterPro

GO - Biological processi

  1. cyclic nucleotide biosynthetic process Source: InterPro
  2. intracellular signal transduction Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciGFOR411154:GI79-18-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Complete circular genomeImported (EC:4.6.1.-Imported)
Gene namesi
Ordered Locus Names:GFO_0018Imported
OrganismiGramella forsetii (strain KT0803)Imported
Taxonomic identifieri411154 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeGramella
ProteomesiUP000000755 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi411154.GFO_0018.

Structurei

3D structure databases

ProteinModelPortaliA0LXB4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, TPR repeatUniRule annotation

Phylogenomic databases

eggNOGiCOG0457.
KOiK05345.
OMAiNISENTY.
OrthoDBiEOG6C012M.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR018297. A/G_cyclase_CS.
IPR029787. Nucleotide_cyclase.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00211. Guanylate_cyc. 1 hit.
PF00515. TPR_1. 1 hit.
PF13181. TPR_8. 2 hits.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
PROSITEiPS00452. GUANYLATE_CYCLASE_1. 1 hit.
PS50125. GUANYLATE_CYCLASE_2. 1 hit.
PS50005. TPR. 5 hits.
PS50293. TPR_REGION. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0LXB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIHLLKYRT FLFLLLFLVN SVNKGFSQNQ TKADSLEKIY NSSSRARQNL
60 70 80 90 100
EILKDLSENS IAPYMKLKFS EELLEIAKKR NSQSYFYTGY LQKGNALASR
110 120 130 140 150
GDFTEALESY FQAASVAKNE KELGLIKVTL GDVYSLTKNH QRSLNYYNEA
160 170 180 190 200
IEIFRKTKDS LTLGSVIFNA GDGYLKNNQM DMAISYLEES EQIFKNINFD
210 220 230 240 250
LGLAYCSGTL GLAYAKLGRN EEAEKNIQQA IQALEKAEDY SPICEFLNGM
260 270 280 290 300
ADIYTEKNED STAIEFASIS RDLARTYGFK NETREANLRL AQIYEKTGNI
310 320 330 340 350
PEAYKFYKEY IIYRDSVLNV STAQNMAGLR ADYEVAQKQI EVDLLSAQRE
360 370 380 390 400
NQQLVVISIA VASFLVCLLA FGLYRRNRFI KRTSAIIEKE KNRSELLLLN
410 420 430 440 450
ILPEETAREL KKNGKVRAKK FESVTVLFAD FKRFTLIAEN LPPERLIKTI
460 470 480 490 500
DYYFSQFDKI MEKYDIEKIK TIGDSYMAAS GLPFPNQDHA YKILMAAFEM
510 520 530 540 550
TQFVKETKEN SLYDDANFDV RVGLNSGPVV AGVVGTKKFA YDIWGDTVNI
560 570 580 590 600
AARMESHSDI GKINISENTY DLIKDKFDCE YRGEVEVKNG RILKMYYVKD
610
IKEEENKIAG
Length:610
Mass (Da):69,795
Last modified:December 12, 2006 - v1
Checksum:i4954A151C7849AE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU207366 Genomic DNA. Translation: CAL65009.1.
RefSeqiYP_860099.1. NC_008571.1.

Genome annotation databases

EnsemblBacteriaiCAL65009; CAL65009; GFO_0018.
KEGGigfo:GFO_0018.
PATRICi22068909. VBIGraFor5527_0018.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU207366 Genomic DNA. Translation: CAL65009.1.
RefSeqiYP_860099.1. NC_008571.1.

3D structure databases

ProteinModelPortaliA0LXB4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi411154.GFO_0018.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL65009; CAL65009; GFO_0018.
KEGGigfo:GFO_0018.
PATRICi22068909. VBIGraFor5527_0018.

Phylogenomic databases

eggNOGiCOG0457.
KOiK05345.
OMAiNISENTY.
OrthoDBiEOG6C012M.

Enzyme and pathway databases

BioCyciGFOR411154:GI79-18-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR018297. A/G_cyclase_CS.
IPR029787. Nucleotide_cyclase.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00211. Guanylate_cyc. 1 hit.
PF00515. TPR_1. 1 hit.
PF13181. TPR_8. 2 hits.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
PROSITEiPS00452. GUANYLATE_CYCLASE_1. 1 hit.
PS50125. GUANYLATE_CYCLASE_2. 1 hit.
PS50005. TPR. 5 hits.
PS50293. TPR_REGION. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter."
    Bauer M., Kube M., Teeling H., Richter M., Lombardot T., Allers E., Wuerdemann C.A., Quast C., Kuhl H., Knaust F., Woebken D., Bischof K., Mussmann M., Choudhuri J.V., Meyer F., Reinhardt R., Amann R.I., Gloeckner F.O.
    Environ. Microbiol. 8:2201-2213(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT0803Imported.

Entry informationi

Entry nameiA0LXB4_GRAFK
AccessioniPrimary (citable) accession number: A0LXB4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: April 29, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.