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A0LSH9 (A0LSH9_ACIC1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Cellulose-binding, family II EMBL ABK52389.1
Gene names
Ordered Locus Names:Acel_0616
OrganismAcidothermus cellulolyticus (strain ATCC 43068 / 11B) [Complete proteome] [HAMAP]
Taxonomic identifier351607 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Acidothermaceae › Acidothermus

Protein attributes

Sequence length763 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3737 Potential EMBL ABK52389.1
Chain38 – 763726 Potential EMBL ABK52389.1
PRO_5000166575

Sequences

Sequence LengthMass (Da)Tools
A0LSH9 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: EAF60F7759511AD0

FASTA76380,339
        10         20         30         40         50         60 
MGLVRRPARA FVATAAGTAV AAAATLGSIT MPSATAAPAG FVTASGGQFV LNGLPYRYGG 

        70         80         90        100        110        120 
TNNYYLSYQS HADVDDVLAK AQAMNLSVIR TWGFIDIGSL DGSVPTIDGN KNGFYFQYWD 

       130        140        150        160        170        180 
PSTGAPAYND GPTGLQGLDY AIASAAAHGL RVIVVLTNDW KEFGGMDQYD KWYGLPYHDN 

       190        200        210        220        230        240 
FYTDPRTQQA YKNWVNHLLN RVNSITGVTY KNDPTIFAWE LANEPRCVGS GTLPTSGTCT 

       250        260        270        280        290        300 
QATIVNWVDQ MSAYVKSIDP NHMVSVGDEG FYIGSTQGSG WPYNDPSDGV DNNALLRVKN 

       310        320        330        340        350        360 
IDFGTYHLYP NYWGQNADWG TQWIKDHIAN AAAIGKPTIL EEFGWQDTGT RDSVYQTWTQ 

       370        380        390        400        410        420 
TVRTNGGAGW NFWMLAGNVN GQPYPNYDGF NVYYPSSTAT VLASEALAIS TGTSPPPSPS 

       430        440        450        460        470        480 
SSPSSSPSPS PSPSASPSAS PSASSSPSPS PSSSPVSGGV KVQYKNNDSA PGDNQIKPGL 

       490        500        510        520        530        540 
QLVNTGSSSV DLSTVTVRYW FTRDGGSSTL VYNCDWAAMG CGNIRASFGS VNPATPTADT 

       550        560        570        580        590        600 
YLQLSFTGGT LAAGGSTGEI QNRVNKSDWS NFDETNDYSY GTNTAFQDWT KVTVYVNGRL 

       610        620        630        640        650        660 
VWGTEPSGTS PSPTPSPSPT PSPSPSPTPS PSSSPSPSPS PSPSPTPSPS PSPSPSPSVS 

       670        680        690        700        710        720 
SSGVGCRATY VVNSDWGSGF TATVTVTNTG SRATSGWTVA WSFGGNQTVT NYWNTALTQS 

       730        740        750        760 
GASVTATNLS YNNVIQPGQS TTFGFNGSYS GTNTAPTLTC TAS

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References

[1]"Complete sequence of Acidothermus cellulolyticus 11B."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Zharchuk I., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Berry A.M., Adney W.S., Normand P., Leu D., Pujic P., Richardson P.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43068 / 11B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000481 Genomic DNA. Translation: ABK52389.1.
RefSeqYP_872375.1. NC_008578.1.

3D structure databases

ProteinModelPortalA0LSH9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0LSH9.

Protein family/group databases

CAZyCBM2. Carbohydrate-Binding Module Family 2.
CBM3. Carbohydrate-Binding Module Family 3.
GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4486398.
GenomeReviewsGene locus Acel_0616 in contig CP000481_GR.
KEGGace:Acel_0616.
PATRIC20671626. VBIAciCel132453_0659.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3934.

Family and domain databases

InterProIPR008965. Carb-bd_dom.
IPR001956. CBD_3.
IPR012291. CBD_carb-bd_dom.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
Gene3DG3DSA:2.60.40.710. CBD_3. 1 hit.
G3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00553. CBM_2. 1 hit.
PF00942. CBM_3. 1 hit.
PF00150. Cellulase. 1 hit.
[Graphical view]
SMARTSM00637. CBD_II. 1 hit.
SM01067. CBM_3. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 2 hits.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
PS51172. CBM3. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0LSH9_ACIC1
AccessionPrimary (citable) accession number: A0LSH9
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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