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A0LSH8 (A0LSH8_ACIC1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 6 EMBL ABK52388.1
Gene names
Ordered Locus Names:Acel_0615
OrganismAcidothermus cellulolyticus (strain ATCC 43068 / 11B) [Complete proteome] [HAMAP]
Taxonomic identifier351607 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Acidothermaceae › Acidothermus

Protein attributes

Sequence length1209 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Keywords
   DomainSignal EMBL ABK52388.1
   Molecular functionHydrolase EMBL ABK52388.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellulose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncellulase activity

Inferred from electronic annotation. Source: InterPro

polysaccharide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ABK52388.1
Chain36 – 12091174 Potential EMBL ABK52388.1
PRO_5000166574

Sequences

Sequence LengthMass (Da)Tools
A0LSH8 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: D4CA72A18FDF5841

FASTA1,209124,591
        10         20         30         40         50         60 
MPAISKRLRA GVLAGAVSIA ASIVPLAMQH PAIAATHVDN PYAGATFFVN PYWAQEVQSE 

        70         80         90        100        110        120 
AANQTNATLA AKMRVVSTYS TAVWMDRIAA INGVNGGPGL TTYLDAALSQ QQGTTPEVIE 

       130        140        150        160        170        180 
IVIYDLPGRD CAALASNGEL PATAAGLQTY ETQYIDPIAS ILSNPKYSSL RIVTIIEPDS 

       190        200        210        220        230        240 
LPNAVTNMSI QACATAVPYY EQGIEYALTK LHAIPNVYIY MDAAHSGWLG WPNNASGYVQ 

       250        260        270        280        290        300 
EVQKVLNASI GVNGIDGFVT NTANYTPLKE PFMTATQQVG GQPVESANFY QWNPDIDEAD 

       310        320        330        340        350        360 
YAADLYSRFV AAGFPSSIGM LIDTSRNGWG GPNEPTGPST ATDVNTFVNQ SKIDLRQHRG 

       370        380        390        400        410        420 
LWCNQNGAGL GQPPQASPTD FPNAHLDAYV WIKPPGESDG TSAASDPTTG KKSDPMCDPT 

       430        440        450        460        470        480 
YTTSYGVLTN ALPNSPIAGQ WFPAQFDQLV ANARPAVPTS TSSSPPPPPP SPSASPSPSP 

       490        500        510        520        530        540 
SPSPSSSPSP SPSPSSSPSP SPSPSPSPSS SPSPSPSSSP SPSPSPSPSP SSSPSPSPSS 

       550        560        570        580        590        600 
SPSPSPSPSP SPSSSPSPSP TSSPVSGGLK VQYKNNDSAP SDNQIKPGLQ LVNTGSSSVD 

       610        620        630        640        650        660 
LSTVTVRYWF TRDGGSSTLV YNCDWAAMGC GNIRASFGSV NPATPTADTY LQLSFTGGTL 

       670        680        690        700        710        720 
AAGGSTGEIQ NRVNKSDWSN FTETNDYSYG TNTTFQDWTK VTVYVNGVLV WGTEPSGTSP 

       730        740        750        760        770        780 
SPTPSPSPSP SPSPGGDVTP PSVPTGLVVT GVSGSSVSLA WNASTDNVGV AHYNVYRNGV 

       790        800        810        820        830        840 
LVGQPTVTSF TDTGLAAGTA YTYTVAAVDA AGNTSAPSTP VTATTTSPSP SPTPTGTTVT 

       850        860        870        880        890        900 
DCTPGPNQNG VTSVQGDEYR VQTNEWNSSA QQCLTINTAT GAWTVSTANF SGGTGGAPAT 

       910        920        930        940        950        960 
YPSIYKGCHW GNCTTKNVGM PIQISQIGSA VTSWSTTQVS SGAYDVAYDI WTNSTPTTTG 

       970        980        990       1000       1010       1020 
QPNGTEIMIW LNSRGGVQPF GSQTATGVTV AGHTWNVWQG QQTSWKIISY VLTPGATSIS 

      1030       1040       1050       1060       1070       1080 
NLDLKAIFAD AAARGSLNTS DYLLDVEAGF EIWQGGQGLG SNSFSVSVTS GTSSPTPSPS 

      1090       1100       1110       1120       1130       1140 
PTPTPSPTPT PSPSPTPSPS PTSSPSSSGV ACRATYVVNS DWGSGFTATV TVTNTGSRAT 

      1150       1160       1170       1180       1190       1200 
NGWTVAWSFG GNQTVTNYWN TALTQSGASV TATNLSYNNV IQPGQSTTFG FNGSYSGTNA 


APTLSCTAS

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References

[1]"Complete sequence of Acidothermus cellulolyticus 11B."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Zharchuk I., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Berry A.M., Adney W.S., Normand P., Leu D., Pujic P., Richardson P.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43068 / 11B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000481 Genomic DNA. Translation: ABK52388.1.
RefSeqYP_872374.1. NC_008578.1.

3D structure databases

ProteinModelPortalA0LSH8.
SMRA0LSH8. Positions 739-825.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0LSH8.

Protein family/group databases

CAZyCBM2. Carbohydrate-Binding Module Family 2.
CBM3. Carbohydrate-Binding Module Family 3.
GH12. Glycoside Hydrolase Family 12.
GH6. Glycoside Hydrolase Family 6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4486397.
GenomeReviewsGene locus Acel_0615 in contig CP000481_GR.
KEGGace:Acel_0615.
PATRIC20671624. VBIAciCel132453_0658.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5297.

Family and domain databases

InterProIPR016288. Beta_cellobiohydrolase.
IPR008965. Carb-bd_dom.
IPR001956. CBD_3.
IPR012291. CBD_carb-bd_dom.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR008985. ConA-like_lec_gl.
IPR003961. Fibronectin_type3.
IPR013319. Glyco_hydro_11/12_cat.
IPR002594. Glyco_hydro_12.
IPR001524. Glyco_hydro_6_CS.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.60.40.710. CBD_3. 1 hit.
G3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.
G3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PfamPF00553. CBM_2. 1 hit.
PF00942. CBM_3. 1 hit.
PF00041. fn3. 1 hit.
PF01670. Glyco_hydro_12. 1 hit.
PF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PRINTSPR00733. GLHYDRLASE6.
SMARTSM00637. CBD_II. 1 hit.
SM01067. CBM_3. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 2 hits.
SSF49899. ConA_like_lec_gl. 1 hit.
SSF49265. FN_III-like. 1 hit.
SSF51989. Glyco_hydro_6. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
PS51172. CBM3. 1 hit.
PS50853. FN3. 1 hit.
PS00655. GLYCOSYL_HYDROL_F6_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0LSH8_ACIC1
AccessionPrimary (citable) accession number: A0LSH8
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info