A0LRM9 (A0LRM9_ACIC1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17 HAMAP MF_01345 RuleBase RU003873

Gene names

Name:	rpsQ HAMAP MF_01345
Ordered Locus Names:	Acel_0315

Organism

Acidothermus cellulolyticus (strain ATCC 43068 / 11B) [Complete proteome] [HAMAP]

Taxonomic identifier

351607 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Acidothermaceae › Acidothermus

Protein attributes

Sequence length	96 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal By similarity. RuleBase RU003873 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP MF_01345
Subunit structure	Part of the 30S ribosomal subunit By similarity. HAMAP MF_01345
Sequence similarities	Belongs to the ribosomal protein S17P family. HAMAP MF_01345 RuleBase RU003872

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01345 RuleBase RU003873
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01345 RuleBase RU003872 EMBL ABK52089.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0LRM9 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: B71D77C361180D81	FASTA	96	11,094
	10 20 30 40 50 60 MSEQIEQSTA TKPRRGIRKV REGVVVSDKM DKTIVVAVED RVKHPLYGKV MRRTSKLKAH 70 80 90 DEQNTAKVGD RVLLMETRPL SATKRWRLVR IVERAK

References

[1]

"Complete sequence of Acidothermus cellulolyticus 11B." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Zharchuk I., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Berry A.M., Adney W.S., Normand P., Leu D., Pujic P., Richardson P. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43068 / 11B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000481 Genomic DNA. Translation: ABK52089.1.
RefSeq	YP_872075.1. NC_008578.1.
3D structure databases
ProteinModelPortal	A0LRM9.
SMR	A0LRM9. Positions 18-95.
ModBase	Search...
Protein-protein interaction databases
STRING	A0LRM9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4486469.
GenomeReviews	Gene locus Acel_0315 in contig CP000481_GR.
KEGG	ace:Acel_0315.
PATRIC	20670992. VBIAciCel132453_0343.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0186.
HOGENOM	HBG750455.
OMA	TIRECRP.
PhylomeDB	A0LRM9.
Family and domain databases
HAMAP	MF_01345_B. Ribosomal_S17_B. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02961.
PANTHER	PTHR10744. Ribosomal_S17. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0LRM9_ACIC1

Accession

Primary (citable) accession number: A0LRM9

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)