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A0LPM7 (A0LPM7_SYNFM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.3.5.8 EMBL ABK19379.1
Gene names
Ordered Locus Names:Sfum_3709
OrganismSyntrophobacter fumaroxidans (strain DSM 10017 / MPOB) [Complete proteome] [HAMAP]
Taxonomic identifier335543 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophobacteraceaeSyntrophobacter

Protein attributes

Sequence length488 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABK19379.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processfolic acid-containing compound biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

oxo-acid-lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0LPM7 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: 450D4247C93E5EAF

FASTA48854,737
        10         20         30         40         50         60 
MKTSTRSVHV VEPVLYRALE TPVSDLEFIA VARRCAAQPD SVVLLSGGKV PLEGESRYSI 

        70         80         90        100        110        120 
AAWDPFLLFK SKGSRCLVHG PSGSESRRGD PLAVLDELFA RFSPGYSPVI PPFSGGAIGY 

       130        140        150        160        170        180 
FAYDLKNAIE RLPRTARDDL GLPDIWLMWP RRILVHDRIE KRLHYLYLTP APAGKRGPPH 

       190        200        210        220        230        240 
RTPSPDPVEA FLDGIPPVPE PEERDNGFRV NGLRSNFSRD AYLLAVEKVR LYIGEGDIYQ 

       250        260        270        280        290        300 
ANLSQRFQFR LDGDPFLLWE SLFRANPAAF YAFVDAGDHQ VLSTSMERFL YQRDGRIETR 

       310        320        330        340        350        360 
PIKGTARRGA TPEEDEALKS ALLTSRKEDA ELSMIVDLLR NDLGRICLPR TIRVREHKRL 

       370        380        390        400        410        420 
ESYQNVHHMV SIVTGRPRPE LTPGELLRAV FPGGSVTGCP KIRAMEIIDE LEPHVRHVYT 

       430        440        450        460        470        480 
GSIGYLGWHG NIDLNIAIRT GILQRGTCRF SVGGGIVHDS RPEDEYQETL DKGQTLLRLI 


EASMKGKP 

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References

[1]"Complete sequence of Syntrophobacter fumaroxidans MPOB."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Boone D.R. expand/collapse author list , Brockman F., Culley D., Ferry J., Gunsalus R., McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J., Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10017 / MPOB.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000478 Genomic DNA. Translation: ABK19379.1.
RefSeqYP_847814.1. NC_008554.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA0LPM7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4457961.
GenomeReviewsGene locus Sfum_3709 in contig CP000478_GR.
KEGGsfu:Sfum_3709.
NMPDRfig|335543.6.peg.3821.
PATRIC23853725. VBISynFum78438_4413.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0147.
HOGENOMHBG507440.
OMAMSAWPLA.
PhylomeDBA0LPM7.
ProtClustDBCLSK2398799.

Enzyme and pathway databases

BioCycSFUM335543:SFUM_3709-MONOMER.

Family and domain databases

InterProIPR005801. ADC_synthase.
IPR019999. Anth_synth_I.
IPR006805. Anth_synth_I_N.
IPR015890. Chorismate-bd_C.
IPR005802. Para-NH2Bz_synth_comp_1.
[Graphical view]
Gene3DG3DSA:3.60.120.10. TRPE_1_chor_bd. 1 hit.
KOK01665.
PfamPF04715. Anth_synt_I_N. 1 hit.
PF00425. Chorismate_bind. 1 hit.
[Graphical view]
PRINTSPR00095. ANTSNTHASEI.
SUPFAMSSF56322. TRPE_1_chor_bd. 1 hit.
TIGRFAMsTIGR00553. PabB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0LPM7_SYNFM
AccessionPrimary (citable) accession number: A0LPM7
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)