A0LMJ4 (A0LMJ4_SYNFM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methyl-viologen-reducing hydrogenase, delta subunit EMBL ABK18646.1

Gene names

Ordered Locus Names:

Sfum_2972, Sfum_3014

Organism

Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) [Complete proteome] [HAMAP] EMBL ABK18646.1

Taxonomic identifier

335543 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Syntrophobacterales › Syntrophobacteraceae › Syntrophobacter › Syntrophobacter fumaroxidans

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	methanogenesis Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0LMJ4 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 044E0FABC343622B	FASTA	252	28,018
	10 20 30 40 50 60 MTDSFEPKIL AFLCNWCSYA GADLAGVSRF QYPPTIRVVR TMCSGRVDPV FIVEGLRSGF 70 80 90 100 110 120 DAVAVFGCHI GDCHYLDGNL FTEQRMAMIR ELFELSGIGA ERAQLRWVSA AEGQQFAQFV 130 140 150 160 170 180 KELSDLTRTL GPFDAKRQAL VLSALEGALA APRLRWLLGM ERPLTEGKNV YGEALDLGEY 190 200 210 220 230 240 RQVKATAVRE EYRKALILEC LREGPLSVRQ IAARSGLGVY EISLLLSEVE RAGLVDLHHY 250 EGTTPQFVRL GL

References

[1]

"Complete sequence of Syntrophobacter fumaroxidans MPOB." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Boone D.R. , Brockman F., Culley D., Ferry J., Gunsalus R., McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J., Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10017 / MPOB.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000478 Genomic DNA. Translation: ABK18646.1. CP000478 Genomic DNA. Translation: ABK18688.1.
RefSeq	YP_847081.1. NC_008554.1. YP_847123.1. NC_008554.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	335543.Sfum_3014.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK18646; ABK18646; Sfum_2972. ABK18688; ABK18688; Sfum_3014.
GeneID	4458669. 4458697.
KEGG	sfu:Sfum_2972. sfu:Sfum_3014.
PATRIC	23851971. VBISynFum78438_3541.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1908.
OMA	RMAMIRE.
ProtClustDB	CLSK780651.
Enzyme and pathway databases
BioCyc	SFUM335543:GH6P-3025-MONOMER. SFUM335543:GH6P-3067-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR003813. FlpD. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF02662. FlpD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0LMJ4_SYNFM

Accession

Primary (citable) accession number: A0LMJ4

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 29, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)