A0LLA9 (A0LLA9_SYNFM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type II site-specific deoxyribonuclease EMBL ABK18211.1
EC=3.1.21.4 EMBL ABK18211.1

Gene names

Ordered Locus Names:

Sfum_2533

Organism

Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) [Complete proteome] [HAMAP] EMBL ABK18211.1

Taxonomic identifier

335543 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Syntrophobacterales › Syntrophobacteraceae › Syntrophobacter › Syntrophobacter fumaroxidans

Protein attributes

Sequence length	336 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABK18211.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0LLA9 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 5B68E265505748F3	FASTA	336	37,902
	10 20 30 40 50 60 MRKKDNIESA LEILAALGLP RAQQNERSAL CLLALLNLIP GKAWAHSENP LIGITPMMKF 70 80 90 100 110 120 SGKYYGREYA PNTRETFRRQ TIHQFLQAGV ACYNPDRPDR PVNSPKAVYQ ISPEALALLK 130 140 150 160 170 180 TYGTNKWRAF LKRFLAIRKT LAQRYANERV QKLISVRVAV DQKIRISPGE HSELIKAIIE 190 200 210 220 230 240 SFAPRHAPGC RLVYVGDTGE KWGYFDEKLL ADLGVTIDSH GKMPDVVLFY PEKHWLLLVE 250 260 270 280 290 300 SVTSHGPVDS KRHTELAVLF ADSSAGLVYV TAFPSRAVMQ RYLSEIAWET EVWIADAPSH 310 320 330 LIHFNGPRFL GPYDGKLGEK PKLADKGHLL PEYKTN

References

[1]

"Complete sequence of Syntrophobacter fumaroxidans MPOB." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Boone D.R. , Brockman F., Culley D., Ferry J., Gunsalus R., McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J., Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10017 / MPOB.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000478 Genomic DNA. Translation: ABK18211.1.
RefSeq	YP_846646.1. NC_008554.1.
3D structure databases
ProteinModelPortal	A0LLA9.
ModBase	Search...
Protein-protein interaction databases
STRING	335543.Sfum_2533.
Protein family/group databases
REBASE	13882. SfuMORF2532P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK18211; ABK18211; Sfum_2533.
GeneID	4459149.
KEGG	sfu:Sfum_2533.
PATRIC	23850877. VBISynFum78438_3004.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG274694.
HOGENOM	HOG000015232.
KO	K01155.
OMA	EIAWETE.
ProtClustDB	CLSK935823.
Enzyme and pathway databases
BioCyc	SFUM335543:GH6P-2594-MONOMER.
Family and domain databases
InterPro	IPR009528. Restrct_endonuc_II_BsuBI_C. [Graphical view]
Pfam	PF06616. BsuBI_PstI_RE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0LLA9_SYNFM

Accession

Primary (citable) accession number: A0LLA9

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)