A0LD38 (A0LD38_MAGSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) EMBL ABK45881.1

Gene names

Ordered Locus Names:

Mmc1_3395

Organism

Magnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]

Taxonomic identifier

156889 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length	834 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0LD38 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 0B1126BCB05DD68A	FASTA	834	94,475
	10 20 30 40 50 60 MDDHNKSELR KRAEELMLRQ EQIHTKWDRD NVNALIHDLN VHQIELEIQN QELRESQLRL 70 80 90 100 110 120 EKAKQVQESA LARFEALFNS APEGFILIDV SGMVLECNHT TLEMLGCKRE DLIRKPFSAF 130 140 150 160 170 180 VHIEDQPKFY ASYPSFFKST YPKPIEIRLI HKGSAFKHKD HSFIAELTGC STLKQDLFKD 190 200 210 220 230 240 LYHDNPFILV SIYNINAHKL LERELADAKQ AAELANHALL ESHDKLEATV AQRTAALKTS 250 260 270 280 290 300 NEQLKQQMIE REQAQHRLRL TAGVFENTSE AIIITDAANR VMEVNPAFVR ITGYPADEVI 310 320 330 340 350 360 GRDPGFMKSH RHTHEFYAEM WKKIWQTGQW QGEIWDRRHN GEIYPKWLTI NAVYDERGHL 370 380 390 400 410 420 VNCIGIFSDI SRLKATEERL EQLAFFDCLT KLPNRAHFQS RLDHALTAAN RRQNKVGLIF 430 440 450 460 470 480 IDLDHFKHIN DSMGHNAGDQ LLIEAAKRIQ SCVREEDTVA RMGGDEFTII LADLTDTAKV 490 500 510 520 530 540 MTNVALTILE SFTHPIVLED KKLFIGCSLG MAIYPDDSGN AALLIKHADT AMYRAKESGR 550 560 570 580 590 600 NRYSFYTAEM NAQAQSRISL ESELRYAIDH KAFELYYQPK VDAHSSEIVG FEALLRWIHP 610 620 630 640 650 660 TEGVISPNQF IPIAEESGLI AAIGNQVVEM ACQGLQRINR CTPKPLPVAI NLSVRQLRQD 670 680 690 700 710 720 NLVNYFSQTL ANYGIEAEQL ELEVTESFLA KPIEKSAALL QALHQLGYKI AIDDFGTGYS 730 740 750 760 770 780 SLSYLKNFPI HTLKIDRSFV MEVAHNQESR TIVQAIISMA HALGYDLVAE GVETAAQVNV 790 800 810 820 830 LQGLGCGIMQ GFHYARPAPL HEILEILSLG STLAIQAASS LKNPKNTPNE FVSE

References

[1]

"Complete sequence of Magnetococcus sp. MC-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000471 Genomic DNA. Translation: ABK45881.1.
RefSeq	YP_867287.1. NC_008576.1.
3D structure databases
ProteinModelPortal	A0LD38.
ModBase	Search...
Protein-protein interaction databases
STRING	A0LD38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4484081.
GenomeReviews	Gene locus Mmc1_3395 in contig CP000471_GR.
KEGG	mgm:Mmc1_3395.
NMPDR	fig|156889.1.peg.954.
PATRIC	22433447. VBIMagSp23654_3450.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5001.
HOGENOM	HBG751764.
OMA	VAFETHE.
PhylomeDB	A0LD38.
ProtClustDB	CLSK2532813.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF00989. PAS. 2 hits. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 2 hits.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0LD38_MAGSM

Accession

Primary (citable) accession number: A0LD38

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)