Unreviewed, UniProtKB/TrEMBL A0LBX0 (A0LBX0_MAGSM)

Names and origin

Protein names

Submitted name:
    Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) EMBL ABK45463.1

Gene names

Ordered Locus Names:

Mmc1_2972

Organism

Magnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]

Taxonomic identifier

156889 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length	1134 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro two-component signal transduction system (phosphorelay) Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABK45463.1
	Chain	23 – 1134	1112	Potential EMBL ABK45463.1		PRO_5000165859

Sequences

	Sequence		Length	Mass (Da)
	A0LBX0-1 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 718426D68AAD6B7F	FASTA	1,134	126,649
	10 20 30 40 50 60 MKSLTHKLVI FVSALVVVVV AISGWFAYEQ TRHLLLERAL PSLRAKVEAS MGDFLKPYAA 70 80 90 100 110 120 AHGPLQLLAT APSMQALLRA KLAMDVDQQK TQVLLRDVEN LLQNYIKFYP DTWQIRLEGV 130 140 150 160 170 180 ATNGAAWLIV VPAGAQPIAV VEDKLGQTNQ GGEPEASPLR AGEVRYSAIE SDISQGAEGK 190 200 210 220 230 240 PSQAGLSMTL RVDYAGQPAA RLVVYQKLTH SLEQLRGALA GAGQLYVVEP RHFRYVVHPD 250 260 270 280 290 300 RAKQLGQTLG TVWGLSEEFP LLAEGLAALQ SVQTGGRSLQ REDGEHLVHM AWYTVGQAGR 310 320 330 340 350 360 GADVGVIYRL PRQAVLGAFD ALVQRSLWIN LALVMVALLG SALFAGSVTR PLRHLAQVIS 370 380 390 400 410 420 GYGRGEHLPL QYTERSDEVG QIGETFLEMR QAIEARTQAL EEEEQRLNSL FESAVDGILI 430 440 450 460 470 480 IDAKGIIQRY NAGACKLFGY TSKEALGKNV SLLMQDVVGQ EHDLFITRFL QEGGTRVVGN 490 500 510 520 530 540 SREVEARHKD GSALPVQLSV SHFKYAGEDY FTGICHDLRH QHWLQSALKM ANDHLESQVA 550 560 570 580 590 600 ERTEDLTQAN QALQQEVAEH QLTQAKLFLV NQVFEKARQA IVITDHNNKI LDVNPAYEAL 610 620 630 640 650 660 TGFQKQQVVG HDPAVGKSGR HDPAFYARMW RSLLSENHWE GEVWDRRSDG SIYPKYLSID 670 680 690 700 710 720 RVLDRQGSVL NYVAMFQDLT EQKATEEELE RLSHYDPLTG LPNRALFRNR LEHEFLVARR 730 740 750 760 770 780 HNRSVALVLI NLDRFKQIND SFGFTVGDRL LAMVAKRLEQ LVRKTDLIAR QENRQERDSD 790 800 810 820 830 840 TLSRLGGDEF SIILAELRAA EDAAIVARRT VALLEEPYDI EGQEVFLGGS LGVSIYPENA 850 860 870 880 890 900 ESLNGMIQCA ERALVKAKEG GRNTFRFYSE EMNRHSAEQV RLETELRRAV MQERFQLHYQ 910 920 930 940 950 960 PKLEIATGEI EGVEALVRWP RRDGRMFSPD AFIPLAEETG LIVPLGRWIL KQACADVVAI 970 980 990 1000 1010 1020 NAQRVRPLRV AVNLSAKQFQ QEDLEQMVLE ALEETGLETQ LLELELTESM MMGDVDEAIN 1030 1040 1050 1060 1070 1080 TMSILKGLGL TLSIDDFGTG YSSLSYLKRF PVDALKIDQS FVRDLERDSE DAAIVHAVCN 1090 1100 1110 1120 1130 LGESLGMKVV AEGIETQLQM DFLRQLNCDT GQGYFIARPM PLAQLQDFLA QHQG

References

[1]

"Complete sequence of Magnetococcus sp. MC-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000471 Genomic DNA. Translation: ABK45463.1.
RefSeq	YP_866869.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4483490.
GenomeReviews	Gene locus Mmc1_2972 in contig CP000471_GR.
KEGG	mgm:Mmc1_2972.
NMPDR	fig|156889.1.peg.633.
Organism-specific databases
CMR	Search...
Family and domain databases
InterPro	IPR000160. Diguanylate_cyclase-pred. IPR001633. Diiguanylate_Pesterase-pred. IPR003660. HAMP_linker_domain. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. [Graphical view]
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF00672. HAMP. 1 hit. PF00989. PAS. 2 hits. [Graphical view]
SMART	SM00267. DUF1. 1 hit. SM00052. DUF2. 1 hit. SM00304. HAMP. 1 hit. SM00086. PAC. 2 hits. SM00091. PAS. 2 hits. [Graphical view]
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. sensory_box. 2 hits.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50885. HAMP. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0LBX0_MAGSM

Accession

Primary (citable) accession number: A0LBX0

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	June 16, 2009
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)