A0L9T5 (A0L9T5_MAGSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) EMBL ABK44728.1

Gene names

Ordered Locus Names:

Mmc1_2227

Organism

Magnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]

Taxonomic identifier

156889 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length	1275 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABK44728.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 39	39	Potential EMBL ABK44728.1
	Chain	40 – 1275	1236	Potential EMBL ABK44728.1		PRO_5000165792

Sequences

	Sequence		Length	Mass (Da)
	A0L9T5 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: E10157F1C6AA4630	FASTA	1,275	144,626
	10 20 30 40 50 60 MIVQQRGKWM QLSIARKVVY GFAVLIVLAL FSGLMVSSQL VVLQDRVARL QGQRVPLVVN 70 80 90 100 110 120 AVAFVSHVKD ALSALQSWMT TELPRFKQER QHAWQQARRQ LLKLEQILVT DPRLLEQLEP 130 140 150 160 170 180 LKEGLTQLGV LQDRIEALIE KPANKPAHQL YKEQLLPILE SLDVQVRRLV LRENHRPVFA 190 200 210 220 230 240 GGVAEAINSR TQLKELADLR SALSLCRSQL ERILTEPDDA LVQRFGQGLK QADGALAVLV 250 260 270 280 290 300 RADMSQTQRQ ELGQVQELWS EWPALAEQVI VLRQSDHWNL ARHLTGDALL PLWQTLRQRL 310 320 330 340 350 360 DTTVEQQLTT MVEEGRYLEQ SIALSRQVLF FSFVLLLVAG GLWAWWISHR LRSGFHTLLQ 370 380 390 400 410 420 RMSYVSDRIQ QADLTGNWSD CDLDICLIPN HQQDEIGAAV SAYNQLLTNL VVAQGNESRF 430 440 450 460 470 480 IDSLTRMHAI TVRTEWDSQR KIQEILEMGG EILEMESAIV THVDGQMCQV EHLLGQDSLF 490 500 510 520 530 540 EMGQIQPLEQ SFCKQVIDAG HAEAIYRIKG SLLEEHPVHT QFGVESFIGT PLYLGDRFYG 550 560 570 580 590 600 ALSYYSKVPR TKGFSFHDRS LISLLAQWVG WEKYRAQQLK QLEQIHQDLE NAQSVAKIGS 610 620 630 640 650 660 WHWDMQKDNL HWSKELVRLL GLEGDTSHAS YSTYLELIHP DDRAKINRQM AAVTRGMQDR 670 680 690 700 710 720 FEADHRIICH KSGELLHIHA LGIVSRDSRG VPSQMVGTLQ DVTRRKMAEE GLVLAKMIFD 730 740 750 760 770 780 NAGEAIVITD AQGDITDVNP AYQRIMGYTR DEIVGQNPSI LKSGRHDEQF YEQMWNEMLS 790 800 810 820 830 840 EGHWQGEIWD RRKSGEIFPK WLTIDAIRDE QGVISNFVGL FMDITQQKET EEQLEKLAYY 850 860 870 880 890 900 DPLTELPNRA LFRDRLEQEM RLSARGGKSL GLFFIDLDRF KYVNDSLGHD KGDDLLIQVA 910 920 930 940 950 960 GRIKHHLRTS DTVARLGGDE FTVILPGIEQ TNDVARIAGA IVKSLGEVFV LQGHEVFIGG 970 980 990 1000 1010 1020 SIGIAMHPDD GEDYETLTKH ADTAMYRAKE EGRGTYKFFT SDMNEINGRR LSLERALRQA 1030 1040 1050 1060 1070 1080 VECNQLTLHY QPKVDVKQCR ITGMEALVRW NHPEQGLVSP VDFIPIAEET GLIITIGEWV 1090 1100 1110 1120 1130 1140 MQQACMDAKR LARSSRHPLQ VAINLSAKQF QDALLVAKLE RSLQQSGLAP ELLEVEITES 1150 1160 1170 1180 1190 1200 LAMGDVNRTI EQIGELRALG VKVSIDDFGT GYSSLSYLKK LPLNALKIDK SFIQDLYLDS 1210 1220 1230 1240 1250 1260 DDTAIVSSIL SMASALGLSV VAEGVENQAQ IHFLCEKECP TIQGYFFSKP LPFEAFEKFL 1270 LDWDPVKMKH SLEKI

References

[1]

"Complete sequence of Magnetococcus sp. MC-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000471 Genomic DNA. Translation: ABK44728.1.
RefSeq	YP_866134.1. NC_008576.1.
3D structure databases
ProteinModelPortal	A0L9T5.
ModBase	Search...
Protein-protein interaction databases
STRING	A0L9T5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4481993.
GenomeReviews	Gene locus Mmc1_2227 in contig CP000471_GR.
KEGG	mgm:Mmc1_2227.
NMPDR	fig|156889.1.peg.1069.
PATRIC	22431067. VBIMagSp23654_2274.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5001.
PhylomeDB	A0L9T5.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR003018. GAF. IPR003660. HAMP_linker_domain. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. IPR013655. PAS_fold_3. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF01590. GAF. 1 hit. PF00990. GGDEF. 1 hit. PF00672. HAMP. 1 hit. PF00989. PAS. 1 hit. PF08447. PAS_3. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00065. GAF. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 2 hits. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 2 hits.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 2 hits. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0L9T5_MAGSM

Accession

Primary (citable) accession number: A0L9T5

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)