A0L9S8 (A0L9S8_MAGSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) EMBL ABK44721.1

Gene names

Ordered Locus Names:

Mmc1_2220

Organism

Magnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]

Taxonomic identifier

156889 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length	971 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0L9S8 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: E0DDF5B50647EEE8	FASTA	971	110,110
	10 20 30 40 50 60 MDFQYGDKIL FKHITIHNRM LVMVGCAIIS LMFVGGFGLR ELHSNLMQDR KNKTQHLVQV 70 80 90 100 110 120 VVSTLAAYQA QVVAGTLSLR DAQQQAADMV AHMRYGQENY FWINDLNIKM VVHPLRPELN 130 140 150 160 170 180 GQDLSTIKDA NGVFLFTRFV DVVQRQGSGF VEYLWPKPGS IEAVPKISYV EKFAPWGWMV 190 200 210 220 230 240 GSGIYVDDVE HIFQDAASAF MAVILTALLV VWAISVKIGR SITRPLFQTR QAMLRLANGD 250 260 270 280 290 300 LDVPLEDMDR SELGDLSQAL RVFRDQFAIN EGLRLEREES LKQAAEKREE LARIIEISHT 310 320 330 340 350 360 VVLSWENDEE WSLSYVSENC YRILQSGLKS LVLKPLVNPE DLPQMEALLA AGGDASRWVK 370 380 390 400 410 420 LEFRLCLGSE EPRWFECCVL PIKDDHAEVV QYHGVLHDIT ERRKGEHDLR LAQVLFRTTN 430 440 450 460 470 480 EALMISSRDN KIEMVNPAFS RITGYQLDEV LGKGPDLLQS GRHDAPFYTQ MWHALQQDGA 490 500 510 520 530 540 WEGEIWNRRK SGETYPEWLS IATVTNDKGE TVQYVAAFSD ITKRKQAEET ILHQANYDFL 550 560 570 580 590 600 TDLPNRNLFH DRLQTELKRS QRSGQQVALL FIDLDRFKFV NDTLGHNVGD QLLREVAIRL 610 620 630 640 650 660 GHCVRESDTI ARLGGDEFTV ILPELHGPEG VARLAQGMID KLEERYCIQD HELFISASIG 670 680 690 700 710 720 ITIYPEDADN MMDLVKNADV AMYRAKENGR GSFCFYTAEM NADARQLHKI EQALRVALEE 730 740 750 760 770 780 GQFWIHYQPY VQQSSGLITG VEALIRWRNS AGEIVYPDQF IPVAEETGLI VPIGLWVLRS 790 800 810 820 830 840 VIGVIAQWQR EGHPDITFSV NVSARQFQEG HLVGQIKAAL QENQINPQSL MLEITESLMI 850 860 870 880 890 900 RDPEHTLNML KEIKALGVRV ALDDFGTGYS SLGYLKQFPI DLLKIDRSFI NGIANSQDDE 910 920 930 940 950 960 TMVSAIVSMA HSLGVGVIGE GIENDQQLQR VNLHACDYVQ GFFYSRPMPY DELALFFEGY 970 QKSHLGLAES E

References

[1]

"Complete sequence of Magnetococcus sp. MC-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000471 Genomic DNA. Translation: ABK44721.1.
RefSeq	YP_866127.1. NC_008576.1.
3D structure databases
ProteinModelPortal	A0L9S8.
ModBase	Search...
Protein-protein interaction databases
STRING	A0L9S8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4481983.
GenomeReviews	Gene locus Mmc1_2220 in contig CP000471_GR.
KEGG	mgm:Mmc1_2220.
NMPDR	fig|156889.1.peg.1061.
PATRIC	22431047. VBIMagSp23654_2267.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5001.
OMA	RISINYL.
PhylomeDB	A0L9S8.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR004010. Cache_domain. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR003660. HAMP_linker_domain. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013656. PAS_4. IPR013655. PAS_fold_3. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF08269. Cache_2. 1 hit. PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF00672. HAMP. 1 hit. PF08447. PAS_3. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
SMART	SM01049. Cache_2. 1 hit. SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00304. HAMP. 1 hit. SM00086. PAC. 2 hits. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50885. HAMP. 1 hit. PS50113. PAC. 2 hits. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0L9S8_MAGSM

Accession

Primary (citable) accession number: A0L9S8

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)