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A0L852 (A0L852_MAGSM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Tetratricopeptide TPR_2 repeat protein EMBL ABK44145.1
Gene names
Ordered Locus Names:Mmc1_1636
OrganismMagnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]
Taxonomic identifier156889 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length968 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainRepeat RuleBase RU003537
TPR repeat RuleBase RU003339
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0L852 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: D3E1AD456ABFB9C7

FASTA968109,138
        10         20         30         40         50         60 
MESPAAQLSQ AQAYLQQGQL QQAINSYQNL LAQHPESVAA WQGIGSALLA AGQPLQAVDF 

        70         80         90        100        110        120 
FERALALDPQ HYPSILALGT LYQQQGRLER AVQLFLRGAQ LQPNQPLVHF NLGVVLAAQG 

       130        140        150        160        170        180 
RTEQAQSAYR KALALNENIP EAWLNLGNLL SRTGELQQAL VCYQQALQRR PSFTQAGFGL 

       190        200        210        220        230        240 
ANTLTTLKRH TEALTILEPL CQQNPDHAEM MILYGHLLRS QNRQHQARSV FQRILAQQPN 

       250        260        270        280        290        300 
HFAARYGYAT ILLDLGRADL ALPQMQQAAR LNPSHQGLRS DLAFAQHYLS TSPKALYHEH 

       310        320        330        340        350        360 
RLFQTLIAEA LSQQSMRHQP CKEPHKPLKI GFVSSDFRRH PVSFFLEAPF EHHDGESFAF 

       370        380        390        400        410        420 
YGYSNSPVRD ATTQRLQGWA QAWREIFGLT DSVVAQQIVA DGIDILVDLN GHTGGNRLAL 

       430        440        450        460        470        480 
FALQPAPVQV SWLGYPDTTG LEAMAYRLTD TISDPESEGG RYMSETPIYL PHGFHCYRPP 

       490        500        510        520        530        540 
DEAPKVLYQQ LRTGQGVRLA SFNTLTKMGH EVLRLWAEIL TRLPQATLLL KNGGFGSQAV 

       550        560        570        580        590        600 
VDDYLQRFES LGIDSKRIRC MGVTDTLEEH LNLYNQVDIA LDTFPYHGTT TTCEALWMGV 

       610        620        630        640        650        660 
PVVTLQGDHH VNRVGGSLLH QVGLHKLVAS TPKQFVDLVV GLAQDHKRLR TLRGSIRHKM 

       670        680        690        700        710        720 
QNAPLRDELG FTRNLENAFR QIWKMACATP TVSAPQPAYW MDLAPAEKKP TLRLIHHLAR 

       730        740        750        760        770        780 
SGGTLICKCL GSMEQAMLLS EINPRGVHRF NPRQQAHQWY AVGDANRAES MPWDDEEAFL 

       790        800        810        820        830        840 
EAMQEIHAAA QHRNANLLVR DWTHVDFTGY PFRRPQWHLT LAETLSKRFR VRSLFTTRHP 

       850        860        870        880        890        900 
LDQWLSLVKY AQQGGAGVSV SLSLYMEGYR RFAQLCADHG FVRYEDFTVD PDARLQEMCE 

       910        920        930        940        950        960 
KLEIPFDAGY QQRWASYTNI TGDTIGTRGA QQIKPLSRRP VEAGLHRQLQ ENSDYQQILS 


LLGYQDVE

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References

[1]"Complete sequence of Magnetococcus sp. MC-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000471 Genomic DNA. Translation: ABK44145.1.
RefSeqYP_865551.1. NC_008576.1.

3D structure databases

ProteinModelPortalA0L852.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0L852.

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4481872.
GenomeReviewsGene locus Mmc1_1636 in contig CP000471_GR.
KEGGmgm:Mmc1_1636.
NMPDRfig|156889.1.peg.3890.
PATRIC22429841. VBIMagSp23654_1675.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3914.
OMAAITAKIF.

Family and domain databases

InterProIPR001440. TPR-1.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR013105. TPR_2.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 3 hits.
PfamPF00515. TPR_1. 2 hits.
PF07719. TPR_2. 1 hit.
[Graphical view]
SMARTSM00028. TPR. 7 hits.
[Graphical view]
PROSITEPS50005. TPR. 8 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0L852_MAGSM
AccessionPrimary (citable) accession number: A0L852
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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