A0L7G0 (A0L7G0_MAGSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
1,4-alpha-glucan branching enzyme GlgB 1 HAMAP MF_00685
EC=2.4.1.18 HAMAP MF_00685

Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1 HAMAP MF_00685
Alpha-(1->4)-glucan branching enzyme 1 HAMAP MF_00685
Glycogen branching enzyme 1 HAMAP MF_00685

Gene names

Name:	glgB1 HAMAP MF_00685
Ordered Locus Names:	Mmc1_1392

Organism

Magnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]

Taxonomic identifier

156889 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Magnetococcus

Protein attributes

Sequence length	723 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP MF_00685
Catalytic activity	Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP MF_00685 SAAS SAAS006407
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00685 SAAS SAAS006407
Subunit structure	Monomer By similarity. HAMAP MF_00685
Sequence similarities	Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. HAMAP MF_00685

Ontologies

Keywords
Biological process	Carbohydrate metabolism Glycogen biosynthesis HAMAP MF_00685 SAAS SAAS006407 Glycogen metabolism HAMAP MF_00685
Molecular function	Glycosyltransferase HAMAP MF_00685 SAAS SAAS006407 EMBL ABK43903.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	1,4-alpha-glucan branching enzyme activity Inferred from electronic annotation. Source: HAMAP cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	403	1	Nucleophile By similarity HAMAP MF_00685
	Active site	454	1	Proton donor By similarity HAMAP MF_00685

Sequences

	Sequence		Length	Mass (Da)
	A0L7G0 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 4183D48D1D0EDE40	FASTA	723	83,275
	10 20 30 40 50 60 MNLDPQQIQE LQSGFSADPF AVLGRHDQPD GQVAVTVLSP RTERLFLTNI GQEMTRIPDS 70 80 90 100 110 120 DLFHWCGDGR ALPYHYRLRR VDAHGSQTEF HDPYSMPPMI GDLDRHLFNE GTHHHAGQFL 130 140 150 160 170 180 GAHRMEVEGI RGVCFAVWAP NAQRVSVVGD FNQWDGRIHP MRLHQDSGIW EIFIPALKRG 190 200 210 220 230 240 EHYKYEIRTT NGALLLKSDP YGHAHQLRPE NASIITEPSN YPWHDEVWMR ARSRFNWQKK 250 260 270 280 290 300 PISIYEVHLG SWLDAATDPF PNYRELGKRL ARYCSEMGFT HVELMPINEH PFDGSWGYQS 310 320 330 340 350 360 TGYFAVTSRF GDGDDFRAMV DQLHGANIGV ILDWVPAHFP KDAHGLGQFD GTALYEHQDP 370 380 390 400 410 420 RLGEHQDWDT LIFNFGRLEV KSFLISSALH MLTRYHLDGL RVDAVASMLY LDYSREDWLP 430 440 450 460 470 480 NKYGGRENLE AITFLRELNQ AVHHDCPGVL MIAEESTAWP QVTRPPELGG LGFNMKWNMG 490 500 510 520 530 540 WMNDTLSYFS KDPIHRKYHH DNLTFSLYYA FSENFTLPFS HDEVVHGKAS MLGKMPGDEW 550 560 570 580 590 600 QRFANLRLLY TYMFTHPGKK LLFMGCEFGQ SQEWNFSQAL PWELLEHTFH KGLQQLVKDL 610 620 630 640 650 660 NLLYCKETAL HERDFTPDGF QWIDCHDSDQ SIISFQRKSS EGEVVVLLNF TPIPRDNYRI 670 680 690 700 710 720 GVPRPGLYKE IFNADSGHYG GSNYGNGMSQ LLTEPYPWMN QLQSLVLNVP PMAGIILRCE QEG

References

[1]

"Complete sequence of Magnetococcus sp. MC-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000471 Genomic DNA. Translation: ABK43903.1.
RefSeq	YP_865309.1. NC_008576.1.
3D structure databases
ProteinModelPortal	A0L7G0.
SMR	A0L7G0. Positions 112-722.
ModBase	Search...
Protein-protein interaction databases
STRING	A0L7G0.
Protein family/group databases
CAZy	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4481811.
GenomeReviews	Gene locus Mmc1_1392 in contig CP000471_GR.
KEGG	mgm:Mmc1_1392.
NMPDR	fig|156889.1.peg.2075.
PATRIC	22429353. VBIMagSp23654_1433.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0296.
HOGENOM	HBG287139.
OMA	RVYHQNG.
PhylomeDB	A0L7G0.
ProtClustDB	PRK05402.
Family and domain databases
HAMAP	MF_00685. GlgB. [Tree]
InterPro	IPR006407. 1-4-A-glucan_branch_enz. IPR006048. A-amylase_b_C. IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KO	K00700.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF13. PTHR10357:SF13. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. PF02922. CBM_48. 1 hit. [Graphical view]
PIRSF	PIRSF000463. GlgB. 1 hit.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR01515. Branching_enzym. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0L7G0_MAGSM

Accession

Primary (citable) accession number: A0L7G0

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)