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A0L493

- A0L493_MAGSM

UniProt

A0L493 - A0L493_MAGSM

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Protein

Alanine racemase

Gene
Mmc1_0259
Organism
Magnetococcus sp. (strain MC-1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei52 – 521Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei148 – 1481Substrate By similarityUniRule annotation
Active sitei278 – 2781Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei326 – 3261Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciMSP156889:GH36-264-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Mmc1_0259Imported
OrganismiMagnetococcus sp. (strain MC-1)Imported
Taxonomic identifieri156889 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaMagnetococcalesMagnetococcaceaeMagnetococcus
ProteomesiUP000002586: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei52 – 521N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi156889.Mmc1_0259.

Structurei

3D structure databases

ProteinModelPortaliA0L493.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000031444.
KOiK01775.
OMAiIYSHLAL.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0L493-1 [UniParc]FASTAAdd to Basket

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MLPPTLAYTT ANPMQWTHRP TWLEIDLAAL RHNLRQARTA TGPQVAHFPV    50
IKADGYGIGA IAVAHTLEEE ADGFCVALVE EAEQLRTAGI NKRIMLFSGL 100
YPGLEERAIR ARVEPFLSDE INLNALWQAA KCYGPISVHI KIDSGMARLG 150
YHPEHVPSLL DQLAHMPELK LAGLVSHMAC ADDRHSPITN AQLATLSPIL 200
EHPLVKQTQA QLSLANSATI LGHPNAHYQW VRPGIMIYGA SPFFPHTNAA 250
NEGLQPVVRW VTHIQRIHTL EKGKSLGYGH TFTATRPTRI AQLPVGYADG 300
YNRLWSNKGS VLIAGQHCPV VGIVCMDQIA VDISDLQGEV KQWDEAVLLG 350
KQHNAEITLE NWATELKTIP YEILTRIGPR VPRRYRDGSI LSGSFG 396
Length:396
Mass (Da):43,689
Last modified:December 12, 2006 - v1
Checksum:iCBEA69F8BA04D085
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000471 Genomic DNA. Translation: ABK42786.1.
RefSeqiYP_864192.1. NC_008576.1.

Genome annotation databases

EnsemblBacteriaiABK42786; ABK42786; Mmc1_0259.
GeneIDi4483579.
KEGGimgm:Mmc1_0259.
PATRICi22427016. VBIMagSp23654_0275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000471 Genomic DNA. Translation: ABK42786.1 .
RefSeqi YP_864192.1. NC_008576.1.

3D structure databases

ProteinModelPortali A0L493.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 156889.Mmc1_0259.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK42786 ; ABK42786 ; Mmc1_0259 .
GeneIDi 4483579.
KEGGi mgm:Mmc1_0259.
PATRICi 22427016. VBIMagSp23654_0275.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000031444.
KOi K01775.
OMAi IYSHLAL.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci MSP156889:GH36-264-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC-1Imported.

Entry informationi

Entry nameiA0L493_MAGSM
AccessioniPrimary (citable) accession number: A0L493
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: July 9, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3