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A0L493 (A0L493_MAGSM) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site521Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2781Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1481Substrate By similarity HAMAP-Rule MF_01201
Binding site3261Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue521N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A0L493 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: CBEA69F8BA04D085

FASTA39643,689
        10         20         30         40         50         60 
MLPPTLAYTT ANPMQWTHRP TWLEIDLAAL RHNLRQARTA TGPQVAHFPV IKADGYGIGA 

        70         80         90        100        110        120 
IAVAHTLEEE ADGFCVALVE EAEQLRTAGI NKRIMLFSGL YPGLEERAIR ARVEPFLSDE 

       130        140        150        160        170        180 
INLNALWQAA KCYGPISVHI KIDSGMARLG YHPEHVPSLL DQLAHMPELK LAGLVSHMAC 

       190        200        210        220        230        240 
ADDRHSPITN AQLATLSPIL EHPLVKQTQA QLSLANSATI LGHPNAHYQW VRPGIMIYGA 

       250        260        270        280        290        300 
SPFFPHTNAA NEGLQPVVRW VTHIQRIHTL EKGKSLGYGH TFTATRPTRI AQLPVGYADG 

       310        320        330        340        350        360 
YNRLWSNKGS VLIAGQHCPV VGIVCMDQIA VDISDLQGEV KQWDEAVLLG KQHNAEITLE 

       370        380        390 
NWATELKTIP YEILTRIGPR VPRRYRDGSI LSGSFG 

« Hide

References

[1]"Complete sequence of Magnetococcus sp. MC-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC-1 EMBL ABK42786.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000471 Genomic DNA. Translation: ABK42786.1.
RefSeqYP_864192.1. NC_008576.1.

3D structure databases

ProteinModelPortalA0L493.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING156889.Mmc1_0259.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK42786; ABK42786; Mmc1_0259.
GeneID4483579.
KEGGmgm:Mmc1_0259.
PATRIC22427016. VBIMagSp23654_0275.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAIYSHLAL.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycMSP156889:GH36-264-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0L493_MAGSM
AccessionPrimary (citable) accession number: A0L493
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: July 9, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)