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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Shewanella sp. (strain ANA-3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-3561-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:Shewana3_3447
OrganismiShewanella sp. (strain ANA-3)
Taxonomic identifieri94122 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002589 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 342342Ribosomal RNA small subunit methyltransferase CPRO_0000369779Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi94122.Shewana3_3447.

Structurei

3D structure databases

ProteinModelPortaliA0L0V1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OrthoDBiEOG67X1ZC.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

A0L0V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTNPSQVII RNQETLSQHR VLVLNHEADS LPKALLDVAQ SVDALALDYH
60 70 80 90 100
HYLHLAPQAN AKLRCYFGHQ LPHQDKYDTV IVYFPKAKPL APYLFNLAAQ
110 120 130 140 150
HLVADGQLLV VGENKGGVKS LVKLLPKYFA TGVKLDNARH CLLFGSSLID
160 170 180 190 200
TAPEIKLSDW TSQYQLSTPQ GNITICNLVG VFSEKHLDQG TELLLSHLPT
210 220 230 240 250
LSGRVLDFGC GAGVIAAALL KAQPTLSLEC IDINAMALAS CELTLAANGM
260 270 280 290 300
TAKVYPSDGL AQTSGKFDGI ISNPPFHDGL ASTTSIAQRF VADSAKQLQS
310 320 330 340
KGIWQIVTNR HLPYSDTIAA EFGQLTVPAE NNKYKLYSFQ QA
Length:342
Mass (Da):37,188
Last modified:April 14, 2009 - v2
Checksum:i14C362D5767128DB
GO

Sequence cautioni

The sequence ABK49670.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000469 Genomic DNA. Translation: ABK49670.1. Different initiation.
RefSeqiWP_041413148.1. NC_008577.1.

Genome annotation databases

EnsemblBacteriaiABK49670; ABK49670; Shewana3_3447.
KEGGishn:Shewana3_3447.
PATRICi23574886. VBISheSp134792_3808.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000469 Genomic DNA. Translation: ABK49670.1. Different initiation.
RefSeqiWP_041413148.1. NC_008577.1.

3D structure databases

ProteinModelPortaliA0L0V1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi94122.Shewana3_3447.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK49670; ABK49670; Shewana3_3447.
KEGGishn:Shewana3_3447.
PATRICi23574886. VBISheSp134792_3808.

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OrthoDBiEOG67X1ZC.

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-3561-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ANA-3.

Entry informationi

Entry nameiRSMC_SHESA
AccessioniPrimary (citable) accession number: A0L0V1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 14, 2009
Last modified: November 11, 2015
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.