Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Shewana3_2686

Organism
Shewanella sp. (strain ANA-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-2791-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Shewana3_2686Imported
OrganismiShewanella sp. (strain ANA-3)Imported
Taxonomic identifieri94122 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002589 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi94122.Shewana3_2686.

Structurei

3D structure databases

ProteinModelPortaliA0KYP4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A0KYP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQKLPRQAI ASEDSLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA
60 70 80 90 100
ALEKPLSEIE TDFQAFEIPS QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHHLIYA
160 170 180 190 200
QDDDFYRNWM HSANHSLGAF CSGGTVANIT ALWIARNQLL KADGDFKGVT
210 220 230 240 250
REGLIKALRH YGFDDLAILV SERGHYSLGK AVDLLGIGRD NIISIPTDGN
260 270 280 290 300
NKVDVAKMRE VAAELANKRI KVMAIVGVAG TTETGNIDPL RELAALASEL
310 320 330 340 350
NCHFHVDAAW GGASLLSNKY RHLLDGIELA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKNPEFAHA IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
RDGYEILINN SLEKARYFAE QIDAHPDFEL VTAPELCLLT YRYVPAEVQA
460 470 480 490 500
AMQVAIDQGD KVKLARFNEL LDGLTQFIQK HQREQGKSFV SRTRIQPARY
510 520 530 540
FRQPTVVFRV VLANPLTSHE ILNRVLIEQG EIAALDKEFL PALLAMANE
Length:549
Mass (Da):60,829
Last modified:December 12, 2006 - v1
Checksum:iC0865B393CF637F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000469 Genomic DNA. Translation: ABK48913.1.
RefSeqiWP_011717571.1. NC_008577.1.
YP_870319.1. NC_008577.1.

Genome annotation databases

EnsemblBacteriaiABK48913; ABK48913; Shewana3_2686.
KEGGishn:Shewana3_2686.
PATRICi23573288. VBISheSp134792_3017.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000469 Genomic DNA. Translation: ABK48913.1.
RefSeqiWP_011717571.1. NC_008577.1.
YP_870319.1. NC_008577.1.

3D structure databases

ProteinModelPortaliA0KYP4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi94122.Shewana3_2686.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK48913; ABK48913; Shewana3_2686.
KEGGishn:Shewana3_2686.
PATRICi23573288. VBISheSp134792_3017.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-2791-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ANA-3Imported.

Entry informationi

Entry nameiA0KYP4_SHESA
AccessioniPrimary (citable) accession number: A0KYP4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.