Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A0KYP4 (A0KYP4_SHESA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Shewana3_2686 EMBL ABK48913.1
OrganismShewanella sp. (strain ANA-3) [Complete proteome] [HAMAP] EMBL ABK48913.1
Taxonomic identifier94122 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A0KYP4 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: C0865B393CF637F6

FASTA54960,829
        10         20         30         40         50         60 
MTQKLPRQAI ASEDSLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE 

        70         80         90        100        110        120 
TDFQAFEIPS QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL 

       130        140        150        160        170        180 
NQNLVKIETS KAFTPLERQV LGMMHHLIYA QDDDFYRNWM HSANHSLGAF CSGGTVANIT 

       190        200        210        220        230        240 
ALWIARNQLL KADGDFKGVT REGLIKALRH YGFDDLAILV SERGHYSLGK AVDLLGIGRD 

       250        260        270        280        290        300 
NIISIPTDGN NKVDVAKMRE VAAELANKRI KVMAIVGVAG TTETGNIDPL RELAALASEL 

       310        320        330        340        350        360 
NCHFHVDAAW GGASLLSNKY RHLLDGIELA DSVTIDAHKQ MYVPMGAGMV LFKNPEFAHA 

       370        380        390        400        410        420 
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE 

       430        440        450        460        470        480 
QIDAHPDFEL VTAPELCLLT YRYVPAEVQA AMQVAIDQGD KVKLARFNEL LDGLTQFIQK 

       490        500        510        520        530        540 
HQREQGKSFV SRTRIQPARY FRQPTVVFRV VLANPLTSHE ILNRVLIEQG EIAALDKEFL 


PALLAMANE 

« Hide

References

[1]"Complete sequence of chromosome 1 of Shewanella sp. ANA-3."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ANA-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000469 Genomic DNA. Translation: ABK48913.1.
RefSeqYP_870319.1. NC_008577.1.

3D structure databases

ProteinModelPortalA0KYP4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING94122.Shewana3_2686.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK48913; ABK48913; Shewana3_2686.
GeneID4478453.
KEGGshn:Shewana3_2686.
PATRIC23573288. VBISheSp134792_3017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAARYFRQP.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycSSP94122:GJ9K-2791-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0KYP4_SHESA
AccessionPrimary (citable) accession number: A0KYP4
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)