A0KYD0 (A0KYD0_SHESA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease I subunit C EMBL ABK48799.1
EC=3.1.11.1 EMBL ABK48799.1

Gene names

Ordered Locus Names:

Shewana3_2572 EMBL ABK48799.1

Organism

Shewanella sp. (strain ANA-3) [Complete proteome] [HAMAP] EMBL ABK48799.1

Taxonomic identifier

94122 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	470 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABK48799.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease I activity Inferred from electronic annotation. Source: EC nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0KYD0 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: 4A6903FD184F3AB6	FASTA	470	53,943
	10 20 30 40 50 60 MYTASQPSIF WHDYETFGAN PAKDRPAQFA GIRTDLDLNI ISEPETFYCK QSTDYLPSPE 70 80 90 100 110 120 AILITGITPQ LANLKGLPET EFMGRIHALF SQPNTCVAGY NSLRFDDEVT RYGFYRNFID 130 140 150 160 170 180 PYAREWQNGN TRWDIIDLVR ACYAFRPDGI HWPLKEDGSP SFKLEHLTQA NGLSHEKAHD 190 200 210 220 230 240 AMSDVYATIA MAKLIKEKQP KLYQYYFELR RKQAVSAQID VLNMQPLAHV SSKISALQGC 250 260 270 280 290 300 TTLIAPVAHH PSNKNAIICV NLAMDLSPLF ELDVEQIKTR MYTPRAELAA DELPIPVKQV 310 320 330 340 350 360 HLNKCPFITS AKILDDAQAE RLNIDKAFAR EQYKRLKAHP ELREKLAQLF EHEGEVTTTD 370 380 390 400 410 420 PDLMLYSGGF FSPADKAKME IIRHTLPQNL AALDLQFDDG RIPEMLFRYR ARNYPELLND 430 440 450 460 470 QEAQRWRTFC QQRLSDQDYL LKLENLLQDT EGDEHKQKLL AALCHYLRGL

References

[1]

"Complete sequence of chromosome 1 of Shewanella sp. ANA-3." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ANA-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000469 Genomic DNA. Translation: ABK48799.1.
RefSeq	YP_870205.1. NC_008577.1.
3D structure databases
ProteinModelPortal	A0KYD0.
SMR	A0KYD0. Positions 6-470.
ModBase	Search...
Protein-protein interaction databases
STRING	94122.Shewana3_2572.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK48799; ABK48799; Shewana3_2572.
GeneID	4479234.
KEGG	shn:Shewana3_2572.
PATRIC	23573044. VBISheSp134792_2898.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2925.
HOGENOM	HOG000276591.
KO	K01141.
OMA	PYAREWQ.
ProtClustDB	PRK11779.
Family and domain databases
InterPro	IPR023607. Exodeoxyribonuclease_I. IPR013620. Exonuc_X-T_C. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF08411. Exonuc_X-T_C. 1 hit. PF00929. RNase_T. 1 hit. [Graphical view]
PIRSF	PIRSF000977. Exodeoxyribonuclease_I. 1 hit.
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0KYD0_SHESA

Accession

Primary (citable) accession number: A0KYD0

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)