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A0KXW1

- A0KXW1_SHESA

UniProt

A0KXW1 - A0KXW1_SHESA

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Shewana3_2401
Organism
Shewanella sp. (strain ANA-3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-2496-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Shewana3_2401Imported
OrganismiShewanella sp. (strain ANA-3)Imported
Taxonomic identifieri94122 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002589: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi94122.Shewana3_2401.

Structurei

3D structure databases

ProteinModelPortaliA0KXW1.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

A0KXW1-1 [UniParc]FASTAAdd to Basket

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MTLTTRLQFL TFAFVLRVAV FFGLYCGICG LFMAVSDANP EAPNIQLATE    50
FSKEKSAHIS DFLVSEKLDG VRGYWDGKRL MTRQGNPILA PSWFTADFPP 100
TPMDGELWLG RGRFEAISGL IRQASANESE WQNVRFMVFD LPKAQGSFAA 150
RYQQMQTLIA GKSVYLQVIE QVSVESVEAL YQKLDTLVAQ GGEGLILHRR 200
TALYTPGRNP NVMKLKPYLD AEAKVIGHIA GKGQFAGQLG ALRVQTADGR 250
VFSIGTGFSL AERQHPPAIG TLITYKYLGL TVNGLPRFAS FLRIRSDMPP 300
ENKE 304
Length:304
Mass (Da):33,659
Last modified:December 12, 2006 - v1
Checksum:iBCA44740B289D7E1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000469 Genomic DNA. Translation: ABK48630.1.
RefSeqiWP_011717330.1. NC_008577.1.
YP_870036.1. NC_008577.1.

Genome annotation databases

EnsemblBacteriaiABK48630; ABK48630; Shewana3_2401.
GeneIDi4477209.
KEGGishn:Shewana3_2401.
PATRICi23572672. VBISheSp134792_2720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000469 Genomic DNA. Translation: ABK48630.1 .
RefSeqi WP_011717330.1. NC_008577.1.
YP_870036.1. NC_008577.1.

3D structure databases

ProteinModelPortali A0KXW1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 94122.Shewana3_2401.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK48630 ; ABK48630 ; Shewana3_2401 .
GeneIDi 4477209.
KEGGi shn:Shewana3_2401.
PATRICi 23572672. VBISheSp134792_2720.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci SSP94122:GJ9K-2496-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ANA-3.

Entry informationi

Entry nameiA0KXW1_SHESA
AccessioniPrimary (citable) accession number: A0KXW1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: September 3, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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