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A0KXW1 (A0KXW1_SHESA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shewana3_2401 EMBL ABK48630.1
OrganismShewanella sp. (strain ANA-3) [Complete proteome] [HAMAP] EMBL ABK48630.1
Taxonomic identifier94122 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A0KXW1 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: BCA44740B289D7E1

FASTA30433,659
        10         20         30         40         50         60 
MTLTTRLQFL TFAFVLRVAV FFGLYCGICG LFMAVSDANP EAPNIQLATE FSKEKSAHIS 

        70         80         90        100        110        120 
DFLVSEKLDG VRGYWDGKRL MTRQGNPILA PSWFTADFPP TPMDGELWLG RGRFEAISGL 

       130        140        150        160        170        180 
IRQASANESE WQNVRFMVFD LPKAQGSFAA RYQQMQTLIA GKSVYLQVIE QVSVESVEAL 

       190        200        210        220        230        240 
YQKLDTLVAQ GGEGLILHRR TALYTPGRNP NVMKLKPYLD AEAKVIGHIA GKGQFAGQLG 

       250        260        270        280        290        300 
ALRVQTADGR VFSIGTGFSL AERQHPPAIG TLITYKYLGL TVNGLPRFAS FLRIRSDMPP 


ENKE 

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References

[1]"Complete sequence of chromosome 1 of Shewanella sp. ANA-3."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ANA-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000469 Genomic DNA. Translation: ABK48630.1.
RefSeqYP_870036.1. NC_008577.1.

3D structure databases

ProteinModelPortalA0KXW1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING94122.Shewana3_2401.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK48630; ABK48630; Shewana3_2401.
GeneID4477209.
KEGGshn:Shewana3_2401.
PATRIC23572672. VBISheSp134792_2720.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
OrthoDBEOG60919Q.
ProtClustDBPRK09125.

Enzyme and pathway databases

BioCycSSP94122:GJ9K-2496-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0KXW1_SHESA
AccessionPrimary (citable) accession number: A0KXW1
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: February 19, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)