A0KXW1 (A0KXW1_SHESA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABK48630.1

Gene names

Ordered Locus Names:

Shewana3_2401 EMBL ABK48630.1

Organism

Shewanella sp. (strain ANA-3) [Complete proteome] [HAMAP] EMBL ABK48630.1

Taxonomic identifier

94122 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABK48630.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0KXW1 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: BCA44740B289D7E1	FASTA	304	33,659
	10 20 30 40 50 60 MTLTTRLQFL TFAFVLRVAV FFGLYCGICG LFMAVSDANP EAPNIQLATE FSKEKSAHIS 70 80 90 100 110 120 DFLVSEKLDG VRGYWDGKRL MTRQGNPILA PSWFTADFPP TPMDGELWLG RGRFEAISGL 130 140 150 160 170 180 IRQASANESE WQNVRFMVFD LPKAQGSFAA RYQQMQTLIA GKSVYLQVIE QVSVESVEAL 190 200 210 220 230 240 YQKLDTLVAQ GGEGLILHRR TALYTPGRNP NVMKLKPYLD AEAKVIGHIA GKGQFAGQLG 250 260 270 280 290 300 ALRVQTADGR VFSIGTGFSL AERQHPPAIG TLITYKYLGL TVNGLPRFAS FLRIRSDMPP ENKE

References

[1]

"Complete sequence of chromosome 1 of Shewanella sp. ANA-3." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ANA-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000469 Genomic DNA. Translation: ABK48630.1.
RefSeq	YP_870036.1. NC_008577.1.
3D structure databases
ProteinModelPortal	A0KXW1.
ModBase	Search...
Protein-protein interaction databases
STRING	94122.Shewana3_2401.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK48630; ABK48630; Shewana3_2401.
GeneID	4477209.
KEGG	shn:Shewana3_2401.
PATRIC	23572672. VBISheSp134792_2720.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0KXW1_SHESA

Accession

Primary (citable) accession number: A0KXW1

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)