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A0KXW1

- A0KXW1_SHESA

UniProt

A0KXW1 - A0KXW1_SHESA

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Shewana3_2401

Organism
Shewanella sp. (strain ANA-3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (12 Dec 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSSP94122:GJ9K-2496-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Shewana3_2401Imported
    OrganismiShewanella sp. (strain ANA-3)Imported
    Taxonomic identifieri94122 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002589: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi94122.Shewana3_2401.

    Structurei

    3D structure databases

    ProteinModelPortaliA0KXW1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A0KXW1-1 [UniParc]FASTAAdd to Basket

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    MTLTTRLQFL TFAFVLRVAV FFGLYCGICG LFMAVSDANP EAPNIQLATE    50
    FSKEKSAHIS DFLVSEKLDG VRGYWDGKRL MTRQGNPILA PSWFTADFPP 100
    TPMDGELWLG RGRFEAISGL IRQASANESE WQNVRFMVFD LPKAQGSFAA 150
    RYQQMQTLIA GKSVYLQVIE QVSVESVEAL YQKLDTLVAQ GGEGLILHRR 200
    TALYTPGRNP NVMKLKPYLD AEAKVIGHIA GKGQFAGQLG ALRVQTADGR 250
    VFSIGTGFSL AERQHPPAIG TLITYKYLGL TVNGLPRFAS FLRIRSDMPP 300
    ENKE 304
    Length:304
    Mass (Da):33,659
    Last modified:December 12, 2006 - v1
    Checksum:iBCA44740B289D7E1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000469 Genomic DNA. Translation: ABK48630.1.
    RefSeqiWP_011717330.1. NC_008577.1.
    YP_870036.1. NC_008577.1.

    Genome annotation databases

    EnsemblBacteriaiABK48630; ABK48630; Shewana3_2401.
    GeneIDi4477209.
    KEGGishn:Shewana3_2401.
    PATRICi23572672. VBISheSp134792_2720.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000469 Genomic DNA. Translation: ABK48630.1 .
    RefSeqi WP_011717330.1. NC_008577.1.
    YP_870036.1. NC_008577.1.

    3D structure databases

    ProteinModelPortali A0KXW1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 94122.Shewana3_2401.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABK48630 ; ABK48630 ; Shewana3_2401 .
    GeneIDi 4477209.
    KEGGi shn:Shewana3_2401.
    PATRICi 23572672. VBISheSp134792_2720.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SSP94122:GJ9K-2496-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ANA-3Imported.

    Entry informationi

    Entry nameiA0KXW1_SHESA
    AccessioniPrimary (citable) accession number: A0KXW1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 12, 2006
    Last sequence update: December 12, 2006
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3