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Protein
Submitted name:

Transcriptional regulator, Crp/Fnr family

Gene

Shewana3_0617

Organism
Shewanella sp. (strain ANA-3)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi171 – 190H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSSP94122:GJ9K-638-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, Crp/Fnr familyImported
Gene namesi
Ordered Locus Names:Shewana3_0617Imported
OrganismiShewanella sp. (strain ANA-3)Imported
Taxonomic identifieri94122 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002589 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  • intracellular Source: InterPro
  • protein-DNA complex Source: CollecTF

Expressioni

Gene expression databases

CollecTFiEXPREG_00000150.

Interactioni

Protein-protein interaction databases

STRINGi94122.Shewana3_0617.

Structurei

3D structure databases

ProteinModelPortaliA0KST7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 125Cyclic nucleotide-bindingInterPro annotationAdd BLAST101
Domaini139 – 211HTH crp-typeInterPro annotationAdd BLAST73

Phylogenomic databases

eggNOGiENOG4107RYR. Bacteria.
COG0664. LUCA.
HOGENOMiHOG000250565.
KOiK10914.
OMAiTECEVAE.
OrthoDBiPOG091H00WB.

Family and domain databases

CDDicd00038. CAP_ED. 1 hit.
Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR018490. cNMP-bd-like.
IPR018488. cNMP-bd_CS.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR018335. Tscrpt_reg_HTH_Crp-type_CS.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00027. cNMP_binding. 1 hit.
PF00325. Crp. 1 hit.
PRINTSiPR00034. HTHCRP.
SMARTiView protein in SMART
SM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiView protein in PROSITE
PS00889. CNMP_BINDING_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.
PS00042. HTH_CRP_1. 1 hit.
PS51063. HTH_CRP_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0KST7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA
60 70 80 90 100
VLIKDEEGKE MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS
110 120 130 140 150
YKKFKQLIQV NPEILMKLSA QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL
160 170 180 190 200
HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC SRETVGRILK MLEEQNLIQA
210
HGKTIVVYGT R
Length:211
Mass (Da):23,707
Last modified:December 12, 2006 - v1
Checksum:i077E98354F00861D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000469 Genomic DNA. Translation: ABK46856.1.
RefSeqiWP_011070954.1. NC_008577.1.

Genome annotation databases

EnsemblBacteriaiABK46856; ABK46856; Shewana3_0617.
KEGGishn:Shewana3_0617.

Similar proteinsi

Entry informationi

Entry nameiA0KST7_SHESA
AccessioniPrimary (citable) accession number: A0KST7
Entry historyiIntegrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: October 25, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported