Skip Header

Contribute Send feedback
Read comments (?) or add your own

A0KRK1 (SELD_SHESA) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:Shewana3_0176
OrganismShewanella sp. (strain ANA-3) [Complete proteome] [HAMAP]
Taxonomic identifier94122 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 352352Selenide, water dikinase HAMAP MF_00625
PRO_1000051604

Regions

Nucleotide binding236 – 2427ATP Potential

Sites

Active site231 Potential
Site261Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
A0KRK1 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: E1BA30880422E373

FASTA35236,909
        10         20         30         40         50         60 
MSNSAVSSAD SIKLTEYSHG AGCGCKISPK VLTTILASQL PVFTDPNLLV GNQSRDDAAV 

        70         80         90        100        110        120 
YKLNDEIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPMMAIA ILGWPVNKLP 

       130        140        150        160        170        180 
AEIAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALTDLKQ NDTAKADDRL 

       190        200        210        220        230        240 
YLTKPIGIGI LTTAQKQKKL KDEDSQIAVN AMCQLNSIGA KIAKIKGVNA LTDVTGFGLA 

       250        260        270        280        290        300 
GHLLEVCQGA KLTAKLNLDA VPLLPRALDY LAQGCIPGGT HRNYDSYGEH LPTLTDHQKA 

       310        320        330        340        350 
ILCDPQTSGG LLVAVSSEAE AELVALLNAH QIEPICIGSL ETPTSTANVV LC

« Hide

References

[1]"Complete sequence of chromosome 1 of Shewanella sp. ANA-3."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., Tiedje J., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ANA-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000469 Genomic DNA. Translation: ABK46420.1.
RefSeqYP_867826.1. NC_008577.1.

3D structure databases

ProteinModelPortalA0KRK1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0KRK1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4477939.
GenomeReviewsGene locus Shewana3_0176 in contig CP000469_GR.
KEGGshn:Shewana3_0176.
NMPDRfig|94122.5.peg.355.
PATRIC23567876. VBISheSp134792_0415.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0709.
HOGENOMHBG383791.
OMAMMAIAIL.
PhylomeDBA0KRK1.
ProtClustDBPRK00943.

Enzyme and pathway databases

BioCycSSP94122:SHEWANA3_0176-MONOMER.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_SHESA
AccessionPrimary (citable) accession number: A0KRK1
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents