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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciAHYD380703:GH2M-3802-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:AHA_3802
OrganismiAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Taxonomic identifieri380703 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
Proteomesi
  • UP000000756 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 342342Ribosomal RNA small subunit methyltransferase CPRO_0000369685Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi380703.AHA_3802.

Structurei

3D structure databases

ProteinModelPortaliA0KPP9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiEOG67X1ZC.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

A0KPP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSPISAVSQ MLERNQALFV GKRLLVCGAL EDDYPRQLAT LTHSLTVFTT
60 70 80 90 100
DYCYYRSQQA ALGDAILFDH QLGGAPRFDA LLLLMPKAKA EAQYLLAMMT
110 120 130 140 150
PLLEAGAELF LAGENRGGIN GADKLLAPYG DKPVKRDSAR RCSLYHGELS
160 170 180 190 200
KPVEPFELDS WFGRYQCQAG DTELTVLALP GVFSASELDL GSQMLLASLP
210 220 230 240 250
AMQGSLLDFG CGAGVIGSVL AKRNPGLKVT MVDINALALE SSRRTLAING
260 270 280 290 300
LQGEVWASDV YSDIQGKFGR IVSNPPFHAG LKTFYAATET FLAKAPDHLQ
310 320 330 340
SQGSLTIVAN AFLRYQPILE THFKRTEVIS SDAKFKVYLS KV
Length:342
Mass (Da):37,149
Last modified:December 12, 2006 - v1
Checksum:i32DFAD94E3F78F3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000462 Genomic DNA. Translation: ABK38406.1.
RefSeqiWP_011707512.1. NC_008570.1.
YP_858250.1. NC_008570.1.

Genome annotation databases

EnsemblBacteriaiABK38406; ABK38406; AHA_3802.
GeneIDi4489129.
KEGGiaha:AHA_3802.
PATRICi20785272. VBIAerHyd135212_3778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000462 Genomic DNA. Translation: ABK38406.1.
RefSeqiWP_011707512.1. NC_008570.1.
YP_858250.1. NC_008570.1.

3D structure databases

ProteinModelPortaliA0KPP9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi380703.AHA_3802.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK38406; ABK38406; AHA_3802.
GeneIDi4489129.
KEGGiaha:AHA_3802.
PATRICi20785272. VBIAerHyd135212_3778.

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiEOG67X1ZC.

Enzyme and pathway databases

BioCyciAHYD380703:GH2M-3802-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240.

Entry informationi

Entry nameiRSMC_AERHH
AccessioniPrimary (citable) accession number: A0KPP9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: December 12, 2006
Last modified: November 11, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.