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Protein

DNA-binding protein Fis

Gene

fis

Organism
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi74 – 93H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciAHYD380703:G1G7B-3508-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding protein FisUniRule annotation
Gene namesi
Name:fisUniRule annotation
Ordered Locus Names:AHA_3511
OrganismiAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Taxonomic identifieri380703 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
Proteomesi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000233201 – 98DNA-binding protein FisAdd BLAST98

Proteomic databases

PRIDEiA0KNY4

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi380703.AHA_3511

Structurei

3D structure databases

ProteinModelPortaliA0KNY4
SMRiA0KNY4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the transcriptional regulatory Fis family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VY0 Bacteria
COG2901 LUCA
HOGENOMiHOG000256331
KOiK03557
OMAiMVLCEVE

Family and domain databases

HAMAPiMF_00166 DNA_binding_Fis, 1 hit
InterProiView protein in InterPro
IPR005412 Fis_DNA-bd
IPR009057 Homeobox-like_sf
IPR002197 HTH_Fis
PfamiView protein in Pfam
PF02954 HTH_8, 1 hit
PIRSFiPIRSF002097 DNA-binding_Fis, 1 hit
PRINTSiPR01591 DNABINDNGFIS
PR01590 HTHFIS
SUPFAMiSSF46689 SSF46689, 1 hit

Sequencei

Sequence statusi: Complete.

A0KNY4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEQTLTSDA LVTTTHNHAA EPTQRPLRDS VQQALRNYLA QLNGQEVIDL
60 70 80 90
YDMVLSEVEA PMLDVIMQYT RGNQTRAAVM MGINRGTLRK KLKRYGMN
Length:98
Mass (Da):11,170
Last modified:December 12, 2006 - v1
Checksum:i8A92F8A109363408
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000462 Genomic DNA Translation: ABK36227.1
RefSeqiWP_005309538.1, NC_008570.1
YP_857985.1, NC_008570.1

Genome annotation databases

EnsemblBacteriaiABK36227; ABK36227; AHA_3511
GeneIDi4488487
4998781
KEGGiaha:AHA_3511
PATRICifig|380703.7.peg.3499

Entry informationi

Entry nameiFIS_AERHH
AccessioniPrimary (citable) accession number: A0KNY4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: December 12, 2006
Last modified: May 23, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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