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A0KMZ4 (A0KMZ4_AERHH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL ABK38355.1
Ordered Locus Names:AHA_3145
OrganismAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) [Complete proteome] [HAMAP]
Taxonomic identifier380703 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
A0KMZ4 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: AD21FDC86AAE0280

FASTA28431,145
        10         20         30         40         50         60 
MEQKNIKVNG IDVANDKPFV LFGGMNVLES RDMAMAVCEK YVEVTSKLGI PFVFKASWDK 

        70         80         90        100        110        120 
ANRSSIHSYR GPGLEEGMKI FQELKATFGM PVISDLHEPH QAKPVAEVVD VIQLPAFLAR 

       130        140        150        160        170        180 
QTDLVEAMAR TGNVINIKKP QFLSPSQMKN ITDKFEECGN DRLILCERGA NFGYDNLVVD 

       190        200        210        220        230        240 
MLGLGVMKKS TGGYPVIFDV THSLQCRDPM GAASGGRREQ VTELARAGMA VGLAGLFIES 

       250        260        270        280 
HPDPKIARCD GPSALPLEKL EGFLKQMKAI DDLIKGFEPL DTSI

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References

[1]"Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades."
Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D.H., Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S., Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.
J. Bacteriol. 188:8272-8282(2006) [PubMed: 16980456] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000462 Genomic DNA. Translation: ABK38355.1.
RefSeqYP_857645.1. NC_008570.1.

3D structure databases

ProteinModelPortalA0KMZ4.
SMRA0KMZ4. Positions 1-283.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0KMZ4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4489786.
GenomeReviewsGene locus AHA_3145 in contig CP000462_GR.
KEGGaha:AHA_3145.
PATRIC20783908. VBIAerHyd135212_3146.
TIGRAHA_3145.

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAHEPHQAA.
PhylomeDBA0KMZ4.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0KMZ4_AERHH
AccessionPrimary (citable) accession number: A0KMZ4
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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