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Protein

Alpha-amylase

Gene

AHA_0837

Organism
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciAHYD380703:GH2M-838-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:AHA_0837Imported
OrganismiAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)Imported
Taxonomic identifieri380703 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000000756 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi380703.AHA_0837.

Structurei

3D structure databases

ProteinModelPortaliA0KGI8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000272352.
KOiK01176.
OMAiVRFNDQT.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
2.60.40.670. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR002126. Cadherin.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR007110. Ig-like_dom.
IPR003599. Ig_sub.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00801. PKD. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM00409. IG. 1 hit.
SM00089. PKD. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50268. CADHERIN_2. 1 hit.
PS50835. IG_LIKE. 1 hit.
PS50093. PKD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0KGI8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHSTLLRTAL LTAALGSFSH TATAEGVMVH LFQWKFNDIA NECETVLGPK
60 70 80 90 100
GFGGVQITPP AEHKQGSQVW WTVYQPVSFK NFNSFGGSEA ELRSMIARCN
110 120 130 140 150
AAGVKVYADA VFNQLASGSG TATGGGSYNA GQYQYPQFGY NDFHHSGDIT
160 170 180 190 200
NYGDSNNVWN GALYGMPDLN TGSPYVQDQI ATYMKTLLGW GVAGFRIDAA
210 220 230 240 250
KHMAPTDVKA ILDKAGSPKA YLEVIGAGGE SPDIQPGRYT YIDTVTDFKY
260 270 280 290 300
GTDLAANFNG QIKNLKTLGE SWGLLPSAKA FVFVVNHDRE RGHGGGGMLT
310 320 330 340 350
FMSGARYDLA NTFMIAWPYG WKQVMSGYRF ENMSTYETDK GAPGSTPCTD
360 370 380 390 400
SQWNCEQRRP TIMNMALFHN RTEGQPVSNW WDNGNNQIAF GRGDKGFVAI
410 420 430 440 450
NNESGSLVAS LQTALPAGEY CNLLGGNDYC SGGYVTVDGS GKASLNVPGM
460 470 480 490 500
KAAAIIAGCT KASPCGGSAL PGTKFSSMNL RGTHNAWGNT PMTVDANRVW
510 520 530 540 550
SATLTLTGNG DATGAQRFKF DVFGNWAENY GDNEGDGIAD KGSSKDILVS
560 570 580 590 600
GAGSYRITLN ESDLRYTVTP LTSNQAPVAA LSPKTLSVKA GESVVFDASA
610 620 630 640 650
SHDDGGVVSY SWSSGGTAAT ETVRFDTPGT YTVTVTVTDA EGLTASASAT
660 670 680 690 700
VTVTDDNGTY TSVLPTLNFR GTPNAWGSLA MTLVADNQWE ALVTFNGQAN
710 720 730 740 750
QRFKFDVKGD WSKNYGDTNK DGVAELAGSD ILTSVTGQYR VRFNDQTLQY
760 770 780 790 800
SLTPVSVGYA KNFASLNIRG TTNNWGSTPM SLVGDHLWQA SVTFTGSGDG
810 820 830 840 850
NGGQRFKFDV KGDWTQNYGD TNRDGVAEQA GADITTALVG VYVVRFNDQT

LAYSLNAQ
Length:858
Mass (Da):91,578
Last modified:December 12, 2006 - v1
Checksum:iE526803D9E6AF656
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000462 Genomic DNA. Translation: ABK39061.1.
RefSeqiWP_011704783.1. NC_008570.1.
YP_855379.1. NC_008570.1.

Genome annotation databases

EnsemblBacteriaiABK39061; ABK39061; AHA_0837.
GeneIDi4487124.
KEGGiaha:AHA_0837.
PATRICi20779194. VBIAerHyd135212_0836.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000462 Genomic DNA. Translation: ABK39061.1.
RefSeqiWP_011704783.1. NC_008570.1.
YP_855379.1. NC_008570.1.

3D structure databases

ProteinModelPortaliA0KGI8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi380703.AHA_0837.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK39061; ABK39061; AHA_0837.
GeneIDi4487124.
KEGGiaha:AHA_0837.
PATRICi20779194. VBIAerHyd135212_0836.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000272352.
KOiK01176.
OMAiVRFNDQT.
OrthoDBiEOG6RZB1B.

Enzyme and pathway databases

BioCyciAHYD380703:GH2M-838-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
2.60.40.670. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR002126. Cadherin.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR007110. Ig-like_dom.
IPR003599. Ig_sub.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00801. PKD. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM00409. IG. 1 hit.
SM00089. PKD. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50268. CADHERIN_2. 1 hit.
PS50835. IG_LIKE. 1 hit.
PS50093. PKD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240Imported.

Entry informationi

Entry nameiA0KGI8_AERHH
AccessioniPrimary (citable) accession number: A0KGI8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: April 29, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.