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A0KGI8 (A0KGI8_AERHH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length858 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABK39061.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

homophilic cell adhesion

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0KGI8 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: E526803D9E6AF656

FASTA85891,578
        10         20         30         40         50         60 
MHSTLLRTAL LTAALGSFSH TATAEGVMVH LFQWKFNDIA NECETVLGPK GFGGVQITPP 

        70         80         90        100        110        120 
AEHKQGSQVW WTVYQPVSFK NFNSFGGSEA ELRSMIARCN AAGVKVYADA VFNQLASGSG 

       130        140        150        160        170        180 
TATGGGSYNA GQYQYPQFGY NDFHHSGDIT NYGDSNNVWN GALYGMPDLN TGSPYVQDQI 

       190        200        210        220        230        240 
ATYMKTLLGW GVAGFRIDAA KHMAPTDVKA ILDKAGSPKA YLEVIGAGGE SPDIQPGRYT 

       250        260        270        280        290        300 
YIDTVTDFKY GTDLAANFNG QIKNLKTLGE SWGLLPSAKA FVFVVNHDRE RGHGGGGMLT 

       310        320        330        340        350        360 
FMSGARYDLA NTFMIAWPYG WKQVMSGYRF ENMSTYETDK GAPGSTPCTD SQWNCEQRRP 

       370        380        390        400        410        420 
TIMNMALFHN RTEGQPVSNW WDNGNNQIAF GRGDKGFVAI NNESGSLVAS LQTALPAGEY 

       430        440        450        460        470        480 
CNLLGGNDYC SGGYVTVDGS GKASLNVPGM KAAAIIAGCT KASPCGGSAL PGTKFSSMNL 

       490        500        510        520        530        540 
RGTHNAWGNT PMTVDANRVW SATLTLTGNG DATGAQRFKF DVFGNWAENY GDNEGDGIAD 

       550        560        570        580        590        600 
KGSSKDILVS GAGSYRITLN ESDLRYTVTP LTSNQAPVAA LSPKTLSVKA GESVVFDASA 

       610        620        630        640        650        660 
SHDDGGVVSY SWSSGGTAAT ETVRFDTPGT YTVTVTVTDA EGLTASASAT VTVTDDNGTY 

       670        680        690        700        710        720 
TSVLPTLNFR GTPNAWGSLA MTLVADNQWE ALVTFNGQAN QRFKFDVKGD WSKNYGDTNK 

       730        740        750        760        770        780 
DGVAELAGSD ILTSVTGQYR VRFNDQTLQY SLTPVSVGYA KNFASLNIRG TTNNWGSTPM 

       790        800        810        820        830        840 
SLVGDHLWQA SVTFTGSGDG NGGQRFKFDV KGDWTQNYGD TNRDGVAEQA GADITTALVG 

       850 
VYVVRFNDQT LAYSLNAQ 

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References

[1]"Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades."
Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D., Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S., Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.
J. Bacteriol. 188:8272-8282(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 7966 / NCIB 9240.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000462 Genomic DNA. Translation: ABK39061.1.
RefSeqYP_855379.1. NC_008570.1.

3D structure databases

ProteinModelPortalA0KGI8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING380703.AHA_0837.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK39061; ABK39061; AHA_0837.
GeneID4487124.
KEGGaha:AHA_0837.
PATRIC20779194. VBIAerHyd135212_0836.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000272352.
KOK01176.
OMAVRFNDQT.
OrthoDBEOG6RZB1B.
ProtClustDBCLSK729981.

Enzyme and pathway databases

BioCycAHYD380703:GH2M-838-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
2.60.40.670. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR002126. Cadherin.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR007110. Ig-like_dom.
IPR003599. Ig_sub.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00801. PKD. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM00409. IG. 1 hit.
SM00089. PKD. 1 hit.
[Graphical view]
SUPFAMSSF49299. SSF49299. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS50268. CADHERIN_2. 1 hit.
PS50835. IG_LIKE. 1 hit.
PS50093. PKD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0KGI8_AERHH
AccessionPrimary (citable) accession number: A0KGI8
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: April 16, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)